# HG changeset patch
# User ebi-gxa
# Date 1709376183 0
# Node ID 6d8cdc9d8d8447fd3d0e026301a9fe302ec7bb8c
# Parent  baad39d0ade3ea9b74f995c4fe7017472c612d32
planemo upload commit 0264c359f1d638bbbbab515a3502231f679cdcf6

diff -r baad39d0ade3 -r 6d8cdc9d8d84 repository_dependencies.xml
--- a/repository_dependencies.xml	Fri Mar 04 07:29:46 2022 +0000
+++ b/repository_dependencies.xml	Sat Mar 02 10:43:03 2024 +0000
@@ -1,16 +1,22 @@
 <?xml version="1.0" ?>
 <repositories description="Seurat – R toolkit for single cell genomics">
-    <repository owner="ebi-gxa" name="seurat_dim_plot" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="316623eb59bd"/>
-    <repository owner="ebi-gxa" name="seurat_filter_cells" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c4b984347138"/>
-    <repository owner="ebi-gxa" name="seurat_find_clusters" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="eefaffdcd441"/>
-    <repository owner="ebi-gxa" name="seurat_find_markers" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3dd20b758756"/>
-    <repository owner="ebi-gxa" name="seurat_find_variable_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5be60722113a"/>
-    <repository owner="ebi-gxa" name="seurat_normalise_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a835b38e389f"/>
-    <repository owner="ebi-gxa" name="seurat_read10x" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="301cf1b4b43d"/>
-    <repository owner="ebi-gxa" name="seurat_run_tsne" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8d9ceaec2c7f"/>
-    <repository owner="ebi-gxa" name="seurat_scale_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d2f6eac0ad42"/>
-    <repository owner="ebi-gxa" name="seurat_convert" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="970696a7ae0b"/>
-    <repository owner="ebi-gxa" name="seurat_export_cellbrowser" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="249392cd0d99"/>
-    <repository owner="ebi-gxa" name="seurat_find_neighbours" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="99d628557c47"/>
-    <repository owner="ebi-gxa" name="seurat_run_pca" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9547ebb03f6f"/>
+    <repository owner="ebi-gxa" name="seurat_plot" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="95d79f1134f0"/>
+    <repository owner="ebi-gxa" name="seurat_dim_plot" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="64174ac50d78"/>
+    <repository owner="ebi-gxa" name="seurat_filter_cells" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="cd9f564bd63f"/>
+    <repository owner="ebi-gxa" name="seurat_run_umap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="b9424c715a0d"/>
+    <repository owner="ebi-gxa" name="seurat_select_integration_features" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="699c0ca328f2"/>
+    <repository owner="ebi-gxa" name="seurat_find_neighbours" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ba897c57bdd9"/>
+    <repository owner="ebi-gxa" name="seurat_find_variable_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="948fc0276b4f"/>
+    <repository owner="ebi-gxa" name="seurat_map_query" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d2f61c442910"/>
+    <repository owner="ebi-gxa" name="seurat_hover_locator" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="60e3b8960913"/>
+    <repository owner="ebi-gxa" name="seurat_export_cellbrowser" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="36221da750e8"/>
+    <repository owner="ebi-gxa" name="seurat_find_markers" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="07fc9f4841b3"/>
+    <repository owner="ebi-gxa" name="seurat_convert" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="834f7d8e5b4c"/>
+    <repository owner="ebi-gxa" name="seurat_scale_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5e9ba303f9e1"/>
+    <repository owner="ebi-gxa" name="seurat_find_clusters" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="d541e9e62beb"/>
+    <repository owner="ebi-gxa" name="seurat_normalise_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3f49bc9c9213"/>
+    <repository owner="ebi-gxa" name="seurat_integration" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dd6db951c33a"/>
+    <repository owner="ebi-gxa" name="seurat_run_pca" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8ded486b0014"/>
+    <repository owner="ebi-gxa" name="seurat_read10x" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f5db0e853f57"/>
+    <repository owner="ebi-gxa" name="seurat_run_tsne" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0db997e4a81d"/>
 </repositories>
\ No newline at end of file