Mercurial > repos > ecology > cb_div
annotate loop_col_scale.r @ 1:5b31641e6d30 draft default tip
planemo upload for repository https://github.com/Marie59/champ_blocs commit 075fd90d1a39ae7912b48549e5537971635b9620
author | ecology |
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date | Sat, 18 Mar 2023 16:49:37 +0000 |
parents | abc8da8c12ba |
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rev | line source |
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0
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
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1 library("rmarkdown") |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
2 |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
3 df <- indic |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
4 df_full <- indic_full |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
5 dir.create("results") |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
6 slices <- unique(df$Site)[!is.na(unique(df$Site))] |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
7 |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
8 for (v in slices) { |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
9 rmarkdown::render(report, |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
10 output_file = paste0(v, ".docx"), |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
11 output_dir = file.path("results"), |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
12 params = list(Site = v) |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
13 ) |
abc8da8c12ba
planemo upload for repository https://github.com/Marie59/champ_blocs commit 0d86db7d42b608c386a54500064f5f9c9d7019a4
ecology
parents:
diff
changeset
|
14 } |