Mercurial > repos > ecology > eml2eal
comparison vector_templates.R @ 4:0fa9d8240dc3 draft
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/EMLassemblyline commit f00c48e2a16ba6154e6c1aa50330586eefb13a32
| author | ecology |
|---|---|
| date | Sat, 23 Dec 2023 20:39:29 +0000 |
| parents | |
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| 3:409d9329d2be | 4:0fa9d8240dc3 |
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| 1 #15/12/2023 #SEGUINEAU Pauline | |
| 2 | |
| 3 #Load packages | |
| 4 | |
| 5 library(EMLassemblyline) | |
| 6 | |
| 7 #Load arguments | |
| 8 | |
| 9 if (length(commandArgs(trailingOnly = TRUE)) > 0) { | |
| 10 data_vector <- commandArgs(trailingOnly = TRUE)[1] | |
| 11 } | |
| 12 | |
| 13 #Transform arguments | |
| 14 | |
| 15 vector = strsplit(data_vector," ") | |
| 16 | |
| 17 #Make templates to describe data raster | |
| 18 | |
| 19 template_vector_attributes(path = ".",data.path= "data_files", vector.file = vector[[1]]) | |
| 20 template_categorical_variables(path = ".", data.path = "data_files") | |
| 21 | |
| 22 |