Mercurial > repos > ecology > geo_cov_template
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planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/EMLassemblyline commit 4b040fe7867d965fb88ce70cc08081367b62b063
| author | ecology |
|---|---|
| date | Fri, 27 Sep 2024 12:58:31 +0000 |
| parents | dc2dfad1627b |
| children |
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attributeName attributeDefinition class unit dateTimeFormatString missingValueCode missingValueCodeExplanation Id Sampling site ID character "NA" "No information" dist_field_margin Distance to the nearest field margin element (in meters) numeric meter NA No information dist_hedgerow Distance to the nearest hedgerow element (in meters) numeric meter "NA" "No information" dist_forest Distance to the nearest forest element (in meters) numeric meter "NA" "No information" dist_road Distance to the nearest road element (in meters) numeric meter "NA" "No information" dist_water Distance to the nearest water body element (in meters) numeric meter "NA" "No information" dist_urban Distance to the nearest urban element (in meters) numeric meter "NA" "No information" density_field_margins_250m Relative density of field margins in a 250 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_field_margins_500m Relative density of filed margins in a 500 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_field_margins_750m Relative density of filed margins in a 750 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_field_margins_1000m Relative density of filed margins in a 1000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_field_margins_1500m Relative density of filed margins in a 1500 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_field_margins_2000m Relative density of filed margins in a 2000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_field_margins_4000m Relative density of filed margins in a 4000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_roads_250m Relative density of roads in a 250 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_roads_500m Relative density of roads in a 500 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_roads_750m Relative density of roads in a 750 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_roads_1000m Description for density_roads_1000m numeric dimensionless "NA" "No information" density_roads_1500m Relative density of roads in a 1500 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_roads_2000m Relative density of roads in a 2000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_roads_4000m Relative density of roads in a 4000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_hedgerows_250m Relative density of hedgerows in a 250 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_hedgerows_500m Relative density of hedgerows in a 500 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_hedgerows_750m Relative density of hedgerows in a 750 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_hedgerows_1000m Relative density of hedgerows in a 1000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_hedgerows_1500m Relative density of hedgerows in a 1500 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_hedgerows_2000m Relative density of hedgerows in a 2000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" density_hedgerows_4000m Relative density of hedgerows in a 4000 meters buffer around the sampling site (in meters per hectare) numeric dimensionless "NA" "No information" shannon_250m Land-cover Shannon diversity index in 250 meters buffer around the sampling site (no unit of measurement) numeric dimensionless "NA" "No information" shannon_500m Land-cover Shannon diversity index in 500 meters buffer around the sampling site (no unit of measurement) numeric dimensionless "NA" "No information" shannon_750m Land-cover Shannon diversity index in 750 meters buffer around the sampling site (no unit of measurement) numeric dimensionless "NA" "No information" shannon_1000m Land-cover Shannon diversity index in 1000 meters buffer around the sampling site (no unit of measurement) numeric dimensionless "NA" "No information" shannon_1500m Land-cover Shannon diversity index in 1500 meters buffer around the sampling site (no unit of measurement) numeric dimensionless "NA" "No information" shannon_2000m Land-cover Shannon diversity index in 2000 meters buffer around the sampling site (no unit of measurement) numeric dimensionless "NA" "No information" shannon_4000m Land-cover Shannon diversity index in 4000 meters buffer around the sampling site (no unit of measurement) numeric dimensionless "NA" "No information" grassland_250 Percentage of land covered by grassland in different 250 m buffer sizes numeric percent "NA" "No information" forest_250m Percentage of land covered by forest in different 250 m buffer sizes numeric percent "NA" "No information" urban_250m Percentage of land covered by urban area in different 250 m buffer sizes numeric percent "NA" "No information" grassland_500 Percentage of land covered by grassland in different 500 m buffer sizes numeric percent "NA" "No information" forest_500m Percentage of land covered by forest in different 500 m buffer sizes numeric percent "NA" "No information" urban_500m Percentage of land covered by urban area in different 500 m buffer sizes numeric percent "NA" "No information" grassland_750 Percentage of land covered by grassland in different 750 m buffer sizes numeric percent "NA" "No information" forest_750m Percentage of land covered by forest in different 750 m buffer sizes numeric percent "NA" "No information" urban_750m Percentage of land covered by urban area in different 750 m buffer sizes numeric percent "NA" "No information" grassland_1000 Percentage of land covered by grassland in different 1000 m buffer sizes numeric percent "NA" "No information" forest_1000m Percentage of land covered by forest in different 1000 m buffer sizes numeric percent "NA" "No information" urban_1000m Percentage of land covered by urban area in different 1000 m buffer sizes numeric percent "NA" "No information" grassland_1500 Percentage of land covered by grassland in different 1500 m buffer sizes numeric percent "NA" "No information" forest_1500m Percentage of land covered by forest in different 1500 m buffer sizes numeric percent "NA" "No information" urban_1500m Percentage of land covered by urban area in different 1500 m buffer sizes numeric percent "NA" "No information" grassland_2000 Percentage of land covered by grassland in different 2000 m buffer sizes numeric percent "NA" "No information" forest_2000m Description for forest_2000m numeric percent "NA" "No information" urban_2000m Percentage of land covered by urban area in different 2000 m buffer sizes numeric percent "NA" "No information" grassland_4000 Percentage of land covered by grassland in different 4000 m buffer sizes numeric percent "NA" "No information" forest_4000m Percentage of land covered by forest in different 4000 m buffer sizes numeric percent "NA" "No information" urban_4000m Percentage of land covered by urban area in different 4000 m buffer sizes numeric percent "NA" "No information" perc_rapeseed Percentage of rapeseed crops in a 100 m radius around each site at the sampling date numeric percent "NA" "No information" nb_crops Number of different crops in a 100 m radius around each site at the sampling date numeric number "NA" "No information" date Description for date Date YYYY-MM-DD "NA" "No information" X Sampling site longitude numeric dimensionless "NA" "No information" Y Sampling site latitude numeric dimensionless "NA" "No information" recorder Recorder ID used for data collection on the sampling site categorical "NA" "No information" min_t Minimum temperature recorded on the sampling area during the sampling night (in celsius) numeric celsius "NA" "No information" max_wind Maximum wind speed recorded on the sampling area during the sampling night (in km/h) numeric kilometerPerHour "NA" "No information" CSI_ER05 Community specialization index calculated from species level activity on the 0.5 maximum error rate tolerance threshold numeric dimensionless "NA" "No information" CSI_ER01 Community specialization index calculated from species level activity on the 0.1 maximum error rate tolerance threshold numeric dimensionless "NA" "No information" richness_ER05 Species richness calculated from species level activity on the 0.5 maximum error rate tolerance threshold numeric dimensionless "NA" "No information" richness_ER01 Species richness calculated from species level activity on the 0.1 maximum error rate tolerance threshold numeric dimensionless "NA" "No information" Nyclei_ER05 Number of bat passes of Nyclei specie or group recorded during the sampling night on the 0.5 maximum error rate tolerance threshold numeric number "NA" "No information" Nyclei_ER01 Number of bat passes of Nyclei specie or group recorded during the sampling night on the 0.1 maximum error rate tolerance threshold numeric number "NA" "No information" Pippip_ER05 Number of bat passes of Pippip specie or group recorded during the sampling night on the 0.5 maximum error rate tolerance threshold numeric number "NA" "No information" Pippip_ER01 Number of bat passes of Pippip specie or group recorded during the sampling night on the 0.1 maximum error rate tolerance threshold numeric number "NA" "No information" Eptser_ER05 Number of bat passes of Epster specie or group recorded during the sampling night on the 0.5 maximum error rate tolerance threshold numeric number "NA" "No information" Eptser_ER01 Number of bat passes of Epster specie or group recorded during the sampling night on the 0.1 maximum error rate tolerance threshold numeric number "NA" "No information" Nycnoc_ER05 Number of bat passes of Nycnoc specie or group recorded during the sampling night on the 0.5 maximum error rate tolerance threshold numeric number "NA" "No information" Nycnoc_ER01 Number of bat passes of Nycnoc specie or group recorded during the sampling night on the 0.1 maximum error rate tolerance threshold numeric number "NA" "No information" Myo_ER05 Number of bat passes of Myo specie or group recorded during the sampling night on the 0.5 maximum error rate tolerance threshold numeric number "NA" "No information" Myo_ER01 Number of bat passes of Myo specie or group recorded during the sampling night on the 0.1 maximum error rate tolerance threshold numeric number "NA" "No information" Ple_ER05 Number of bat passes of Ple specie or group recorded during the sampling night on the 0.5 maximum error rate tolerance threshold numeric number "NA" "No information" Ple_ER01 Number of bat passes of Ple specie or group recorded during the sampling night on the 0.1 maximum error rate tolerance threshold numeric number "NA" "No information"