Mercurial > repos > ecology > geo_cov_template

changeset 6:5c2ade73e411 draft default tip

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planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/EMLassemblyline commit 61182ba790bdeeb98750403b869051ccad1a736c
author ecology
date Thu, 16 Jan 2025 15:55:10 +0000
parents ea302cc18332
children
files geo_cov_template.xml test-data/taxonomic_coverage.txt
diffstat 2 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/geo_cov_template.xml	Fri Sep 27 12:58:31 2024 +0000
+++ b/geo_cov_template.xml	Thu Jan 16 15:55:10 2025 +0000
@@ -1,7 +1,6 @@
 <tool id="geo_cov_template" name="Make geographic coverage template" version="0.1.0+galaxy0" profile="22.05">
     <description>for EML metadata creation</description>
      <requirements>
-        <requirement type="package" version="4.3.1">r-base</requirement>
         <container type="docker">outils-patrinat.mnhn.fr/metashark:latest</container>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
--- a/test-data/taxonomic_coverage.txt	Fri Sep 27 12:58:31 2024 +0000
+++ b/test-data/taxonomic_coverage.txt	Thu Jan 16 15:55:10 2025 +0000
@@ -1,5 +1,5 @@
 name	name_type	name_resolved	authority_system	authority_id
 Achelia_sp	scientific	Achelia	GBIF Backbone Taxonomy	2118396
 Achelia_spicata	scientific	Achelia spicata	GBIF Backbone Taxonomy	4338694
-Achelia_suflata	scientific	Achelia suflata	GBIF Backbone Taxonomy	NA
+Achelia_suflata	scientific	NA	NA	NA
 Ammothea_adunca	scientific	Ammothea adunca	GBIF Backbone Taxonomy	5720487