Mercurial > repos > ecology > pampa_glmsp
comparison pampa_macros.xml @ 3:c12897ba5f83 draft
"planemo upload for repository https://github.com/ColineRoyaux/PAMPA-Galaxy commit cd938a05cb066b16f2518159fa0ff5e3ed8a2b2b"
author | ecology |
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date | Mon, 26 Apr 2021 16:05:35 +0000 |
parents | 6c14021f678e |
children | 7a69e1c8ba46 |
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2:6c14021f678e | 3:c12897ba5f83 |
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13 <requirement type="package" version="0.3.3.0">r-dharma</requirement> | 13 <requirement type="package" version="0.3.3.0">r-dharma</requirement> |
14 </requirements> | 14 </requirements> |
15 </xml> | 15 </xml> |
16 <xml name="Plot_requirements"> | 16 <xml name="Plot_requirements"> |
17 <requirements> | 17 <requirements> |
18 <requirement type="package" version="3.1.1">r-ggplot2</requirement> | 18 <requirement type="package" version="3.3.3">r-ggplot2</requirement> |
19 <requirement type="package" version="1.3_25">r-boot</requirement> | 19 <requirement type="package" version="1.3_25">r-boot</requirement> |
20 </requirements> | 20 </requirements> |
21 </xml> | 21 </xml> |
22 <xml name="pampa_input_calculate"> | 22 <xml name="pampa_input_calculate"> |
23 <param name="input" type="data" format="tabular" label="Input file" help="Observation data file, with location, year, species and abundance."/> | 23 <param name="input" type="data" format="tabular" label="Input file" help="Observation data file, with location, year, species and abundance."/> |
52 </when> | 52 </when> |
53 </xml> | 53 </xml> |
54 <xml name="pampa_input_GLM"> | 54 <xml name="pampa_input_GLM"> |
55 <param name="input_metric" type="data" format="tabular" label="Input metrics file" help="Metrics data file, with location, year, and metrics informations that can be used as interest variable."/> | 55 <param name="input_metric" type="data" format="tabular" label="Input metrics file" help="Metrics data file, with location, year, and metrics informations that can be used as interest variable."/> |
56 <param name="input_unitobs" type="data" format="tabular" label="Unitobs informations file" help="Unitobs file, with all informations available about unitobs."/> | 56 <param name="input_unitobs" type="data" format="tabular" label="Unitobs informations file" help="Unitobs file, with all informations available about unitobs."/> |
57 <param name="varint" type="data_column" data_ref="input_metric" label="Interest variable from metrics file" help= "Choose the field of the interest variable."/> | 57 <param name="varint" type="data_column" data_ref="input_metric" use_header_names="true" label="Interest variable from metrics file" help= "Choose the field of the interest variable."/> |
58 </xml> | 58 </xml> |
59 <xml name="pampa_var_GLM"> | 59 <xml name="pampa_var_GLM"> |
60 <param name="varrep" type="select" label="Response variables" help= "Choose the response variables you want to include in your analysis." multiple="true"> | 60 <param name="varrep" type="select" label="Response variables" help= "Choose the response variables you want to include in your analysis." multiple="true"> |
61 <option selected="true" value="year">Year</option> | 61 <option selected="true" value="year">Year</option> |
62 <option selected="true" value="site">Site</option> | 62 <option selected="true" value="site">Site</option> |