Mercurial > repos > ecology > pampa_glmsp

diff PAMPA_GLM_SP.xml @ 3:c12897ba5f83 draft

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"planemo upload for repository https://github.com/ColineRoyaux/PAMPA-Galaxy commit cd938a05cb066b16f2518159fa0ff5e3ed8a2b2b"
author ecology
date Mon, 26 Apr 2021 16:05:35 +0000
parents 6c14021f678e
children 7a69e1c8ba46
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line diff
--- a/PAMPA_GLM_SP.xml	Sun Nov 22 18:40:40 2020 +0000
+++ b/PAMPA_GLM_SP.xml	Mon Apr 26 16:05:35 2021 +0000
@@ -119,13 +119,13 @@
 
 - At least one population metric 
 
-+------------------+--------------+---------+---------+-----+       
-| observation.unit | species.code | metric1 | metric2 | ... |            
-+==================+==============+=========+=========+=====+        
-|   site_yearID    | species code |    2    |   0.4   | ... |            
-+------------------+--------------+---------+---------+-----+        
-|        ...       |      ...     |   ...   |   ...   | ... |       
-+------------------+--------------+---------+---------+-----+           
++----------------------+--------------+---------+---------+-----+       
+|   observation.unit   | species.code | metric1 | metric2 | ... |            
++======================+==============+=========+=========+=====+        
+|   year_locationID    | species code |    2    |   0.4   | ... |            
++----------------------+--------------+---------+---------+-----+        
+|          ...         |      ...     |   ...   |   ...   | ... |       
++----------------------+--------------+---------+---------+-----+           
 
 OR
 
@@ -139,15 +139,15 @@
 
 The first input may be extracted from the 'Calculate presence absence' tool.
 
-A tabular file with unitobs or location data which contains at least as much columns as used response variables and separation factor in addition with the 'observation.unit' or 'location' and 'species.code' column.
+A tabular file with observation unit data which contains at least as much columns as used response variables in addition with the 'observation.unit' and 'species.code' column.
 
-+--------------------------------+--------------+---------+--------+------------+-----+       
-| observation.unit OR location   | species.code |  site   |  year  |  habitat   | ... |            
-+================================+==============+=========+========+============+=====+        
-|  site_yearID     OR locationID | species code | site ID |  2000  | habitatID  | ... |            
-+--------------------------------+--------------+---------+--------+------------+-----+        
-|              ...               |      ...     |   ...   |   ...  |     ...    | ... |       
-+--------------------------------+--------------+---------+--------+------------+-----+ 
++-------------------+--------------+---------+--------+------------+-----+       
+| observation.unit  | species.code |  site   |  year  |  habitat   | ... |            
++===================+==============+=========+========+============+=====+        
+|  year_locationID  | species code | site ID |  2000  | habitatID  | ... |            
++-------------------+--------------+---------+--------+------------+-----+        
+|        ...        |      ...     |   ...   |   ...  |     ...    | ... |       
++-------------------+--------------+---------+--------+------------+-----+ 
 
 The site may represent the same entity as the location or represent an aggregation of several locations.
 
@@ -155,12 +155,14 @@
 
 **Output**
 
-Two text files : 
+Three text files : 
 
-- A first text file with GLM results. One analysis per species.
+- A first tabular file with GLM results. One analysis per species.
 
 - A second text file with simple statistics on the whole dataset.
 
+- A third text file with ratings of your analysis based on several criterias.
+
 |
 
 **Source**