diff val_metadata.r @ 0:054b2522a933 draft default tip

planemo upload for repository https://github.com/Marie59/Sentinel_2A/srs_tools commit b32737c1642aa02cc672534e42c5cb4abe0cd3e7

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/val_metadata.r	Mon Jan 09 13:38:38 2023 +0000
@@ -0,0 +1,41 @@
+#Rscript
+
+############################################
+##  Validate ISO 19139 metadata documen   ##
+############################################
+
+#####Packages : ncdf4,
+#               geometa,
+#               httr
+#               xml
+#               xml2
+library(geometa)
+
+#####Load arguments
+
+args <- commandArgs(trailingOnly = TRUE)
+
+if (length(args) < 1) {
+    stop("This tool needs at least 1 argument")
+}else {
+    input_data <- args[1]
+}
+
+##------------------------------------------##
+##      Read ISO 19139 from a file or url   ##
+##------------------------------------------##
+
+# Test depuis catalogue Indores http://indores-tmp.in2p3.fr/geonetwork/srv/fre/catalog.search#/metadata/112ebeea-e79c-422c-8a43-a5a8323b446b
+# <!--ISO 19139 XML compliance: NO-->
+input_data <- xml2::read_xml(input_data)
+
+dir.create("results")
+file.create("results/meta.xml")
+
+xml2::write_xml(input_data, file = "results/meta.xml")
+
+md <- geometa::readISO19139("results/meta.xml")
+
+
+# validate iso
+cat("\nValidation of metadata according to ISO 19139\n", md$validate(), file = "Metadata_validation.txt", fill = 1, append = FALSE)