# HG changeset patch
# User ecology
# Date 1628878631 0
# Node ID 726a387cfdc27e8eb74f217c35afc1ca0bff680a

"planemo upload for repository https://github.com/Marie59/Data_explo_tools commit 60627aba07951226c8fd6bb3115be4bd118edd4e"

diff -r 000000000000 -r 726a387cfdc2 LICENSE.md
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/LICENSE.md	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,674 @@
+                    GNU GENERAL PUBLIC LICENSE
+                       Version 3, 29 June 2007
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+PURPOSE.  THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM
+IS WITH YOU.  SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF
+ALL NECESSARY SERVICING, REPAIR OR CORRECTION.
+
+  16. Limitation of Liability.
+
+  IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING
+WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS
+THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY
+GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE
+USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF
+DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD
+PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
+EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
+SUCH DAMAGES.
+
+  17. Interpretation of Sections 15 and 16.
+
+  If the disclaimer of warranty and limitation of liability provided
+above cannot be given local legal effect according to their terms,
+reviewing courts shall apply local law that most closely approximates
+an absolute waiver of all civil liability in connection with the
+Program, unless a warranty or assumption of liability accompanies a
+copy of the Program in return for a fee.
+
+                     END OF TERMS AND CONDITIONS
+
+            How to Apply These Terms to Your New Programs
+
+  If you develop a new program, and you want it to be of the greatest
+possible use to the public, the best way to achieve this is to make it
+free software which everyone can redistribute and change under these terms.
+
+  To do so, attach the following notices to the program.  It is safest
+to attach them to the start of each source file to most effectively
+state the exclusion of warranty; and each file should have at least
+the "copyright" line and a pointer to where the full notice is found.
+
+    <one line to give the program's name and a brief idea of what it does.>
+    Copyright (C) <year>  <name of author>
+
+    This program is free software: you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation, either version 3 of the License, or
+    (at your option) any later version.
+
+    This program is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+
+    You should have received a copy of the GNU General Public License
+    along with this program.  If not, see <https://www.gnu.org/licenses/>.
+
+Also add information on how to contact you by electronic and paper mail.
+
+  If the program does terminal interaction, make it output a short
+notice like this when it starts in an interactive mode:
+
+    <program>  Copyright (C) <year>  <name of author>
+    This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
+    This is free software, and you are welcome to redistribute it
+    under certain conditions; type `show c' for details.
+
+The hypothetical commands `show w' and `show c' should show the appropriate
+parts of the General Public License.  Of course, your program's commands
+might be different; for a GUI interface, you would use an "about box".
+
+  You should also get your employer (if you work as a programmer) or school,
+if any, to sign a "copyright disclaimer" for the program, if necessary.
+For more information on this, and how to apply and follow the GNU GPL, see
+<https://www.gnu.org/licenses/>.
+
+  The GNU General Public License does not permit incorporating your program
+into proprietary programs.  If your program is a subroutine library, you
+may consider it more useful to permit linking proprietary applications with
+the library.  If this is what you want to do, use the GNU Lesser General
+Public License instead of this License.  But first, please read
+<https://www.gnu.org/licenses/why-not-lgpl.html>.
diff -r 000000000000 -r 726a387cfdc2 anonymization.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/anonymization.xml	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,71 @@
+<tool id="tool_anonymization" name="Spatial coordinates anonymization" version="@VERSION@" profile="20.01">
+    <description> 
+        without loss of the spatial relationships
+    </description>
+    <macros>
+        <import>macro.xml</import>
+    </macros>
+    <requirements> 
+        <requirement  type="package" version="0.8.1">r-tangles</requirement>
+    </requirements>
+    <command detect_errors="exit_code"><![CDATA[
+        Rscript
+            '$__tool_directory__/funct_anomy.r'
+            '$input'
+            '$colnames'
+            '$latitude'
+            '$longitude'
+            '$output'
+        ]]>
+        </command>
+        <inputs>
+            <expand macro="explo_input"/>
+            <param name="latitude" label="Select column containing latitudes in decimal degrees" type="data_column" numerical="true" data_ref="input" multiple="false" use_header_names="true"/>
+            <param name="longitude" label="Select column containing longitudes in decimal degrees" type="data_column" numerical="true" data_ref="input" multiple="false" use_header_names="true"/>
+        </inputs>
+        <outputs>
+            <data name="output" from_work_dir="anonym_data.tabular" format="tabular"/>
+        </outputs>
+        <tests>
+            <test>
+                <param name="input" value="Reel_life_survey_fish_modif.tabular"/>
+                <param name="colnames" value="true"/>
+                <param name="latitude" value="9"/>
+                <param name="longitude" value="10"/>
+                <output name="output">
+                    <assert_contents>
+                        <has_n_lines n="290"/>
+                    </assert_contents>
+                </output>
+            </test>
+        </tests>
+        <help><![CDATA[
+=====================================================
+Anonymization of the spatial coordinates of your data
+=====================================================
+
+
+**What it does**
+
+This tool anonymizes (random with 3 levels of abstraction) longitude and latitude decimal degrees coordinates of a tabular file without loss of the spatial relationships within the data. Handy to allow the sharing of sensitive data regarding threatened species or human activities for instance. 
+
+Input description :
+
+A tabular file with observation data. Must at least contain two columns, latitudes and longitudes.
+
++-------------+------------+
+|   latitude  |  longitude |
++=============+============+
+|      2      |      4     | 
++-------------+------------+
+|     ...     |     ...    |
++-------------+------------+
+
+Output description :
+
+A tabular file with your original data file with its longitude and latitude replaced by anonymized longitudes and latitudes.
+
+    ]]></help>   
+    <citations>
+    </citations>               
+</tool>
diff -r 000000000000 -r 726a387cfdc2 funct_anomy.r
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/funct_anomy.r	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,39 @@
+#Rscript
+
+###########################
+##     Anonymization     ##
+###########################
+
+#####Packages : tangles
+
+#Load arguments
+
+args <- commandArgs(trailingOnly = TRUE)
+
+if (length(args) == 0) {
+    stop("This tool needs at least one argument")
+}else{
+    table <- args[1]
+    hr <- args[2]
+    latitude <- as.numeric(args[3])
+    longitude <- as.numeric(args[4])
+}
+
+if (hr == "false") {
+  hr <- FALSE
+}else{
+  hr <- TRUE
+}
+
+#####Import data
+data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8")
+
+randomized_data <- tangles::tangles(data = as.matrix(data[, c(latitude, longitude)]), depth = 3, rasterdata = FALSE, raster_object = FALSE, saveTangles = FALSE, path = NULL)
+ 
+data[, c(latitude, longitude)] <- NULL
+
+tab_anon <- data.frame(longitude = randomized_data[[1]]$X, latitude = randomized_data[[1]]$Y)
+
+tab_anon <- cbind(data, tab_anon)
+
+write.table(tab_anon, "anonym_data.tabular", row.names = FALSE, quote = FALSE, sep = "\t", dec = ".", fileEncoding = "UTF-8")
diff -r 000000000000 -r 726a387cfdc2 functions.r
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/functions.r	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,22 @@
+#Rscript
+
+#########################################################################################
+####################### Exploration data tools function #################################
+#########################################################################################
+#### Based on Romain Lorrillière R script
+#### Modified by Alan Amosse, Benjamin Yguel and Marie Jossé for integrating within Galaxy-E
+
+######################################### start of the function makeTableAnalyse
+##Species are placed in separated columns and addition of zero on plots where at least one selected species is present
+make_table_analyse <- function(data, var, spe, var2, var3) {
+    tab <- reshape(data
+                  , v.names = var
+                  , idvar = c(var2, var3)
+                  , timevar = spe
+                  , direction = "wide")
+    tab[is.na(tab)] <- 0 ###### remplace les na par des 0 / replace NAs by 0
+
+    colnames(tab) <- sub(paste0(var, "."), "", colnames(tab))### remplace le premier pattern "abond." par le second "" / replace the column names "abond." by ""
+    return(tab)
+}
+######################################### end of the function makeTableAnalyse
diff -r 000000000000 -r 726a387cfdc2 graph_homogeneity_normality.r
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/graph_homogeneity_normality.r	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,130 @@
+#Rscript
+
+#######################################
+##     Homogeneity and normality     ##
+#######################################
+
+#####Packages : car
+#               ggplot2
+#               ggpubr
+#               Cowplot
+
+#####Load arguments
+
+args <- commandArgs(trailingOnly = TRUE)
+
+if (length(args) == 0) {
+    stop("This tool needs at least one argument")
+}else{
+    table <- args[1]
+    hr <- args[2]
+    date <- as.numeric(args[3])
+    spe <- as.numeric(args[4])
+    var <- as.numeric(args[5])
+}
+
+if (hr == "false") {
+  hr <- FALSE
+}else{
+  hr <- TRUE
+}
+
+#####Import data
+data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8")
+data <- na.omit(data)
+coldate <- colnames(data)[date]
+colspe <- colnames(data)[spe]
+colvar <- colnames(data)[var]
+
+#####Your analysis
+
+####Homogeneity of the variance####
+
+##Test of Levene##
+testlevene <- function(data, col1, col2) {
+        data[, col1] <- as.numeric(data[, col1])
+        data[, col2] <- as.factor(data[, col2])
+    tb_levene <- car::leveneTest(y = data[, col1], group = data[, col2])
+
+    return(tb_levene)
+    }
+levene <- capture.output(testlevene(data = data, col1 = colvar, col2 = colspe))
+
+cat("\nwrite table with levene test. \n--> \"", paste(levene, "\"\n", sep = ""), file = "levene.txt", sep = "", append = TRUE)
+
+##Two boxplots to visualize it##
+
+homog_var <- function(data, col1, col2, col3, mult) {
+    data[, col1] <- as.factor(data[, col1])
+    if (mult) {
+            for (spe in unique(data[, col2])) {
+             data_cut <- data[data[, col2] == spe, ]
+             graph_2 <- ggplot2::ggplot(data_cut, ggplot2::aes_string(x = col1, y = col3, color = col1)) +
+             ggplot2::geom_boxplot() +
+             ggplot2::theme(legend.position = "none", axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), panel.background = ggplot2::element_rect(fill = "#d9d4c5", colour = "#d9d4c5", linetype = "solid"),
+              panel.grid.major = ggplot2::element_line(linetype = "solid", colour = "white"),
+              panel.grid.minor = ggplot2::element_line(linetype = "solid", colour = "white"))
+
+            ggplot2::ggsave(paste("Homogeneity_of_", spe, ".png"), graph_2, width = 16, height = 9, units = "cm")
+            }
+        }else{
+        graph_1 <- ggplot2::ggplot(data, ggplot2::aes_string(x = col1, y = col3, color = col1)) +
+          ggplot2::geom_boxplot() +
+          ggplot2::theme(legend.position = "none", axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1))
+
+    #Put multiple panels
+    graph_2 <- graph_1 + ggplot2::facet_grid(rows = ggplot2::vars(data[, col2]), scales = "free") +
+      ggplot2::theme(panel.background = ggplot2::element_rect(fill = "#d9d4c5", colour = "#d9d4c5", linetype = "solid"),
+          panel.grid.major = ggplot2::element_line(linetype = "solid", colour = "white"),
+          panel.grid.minor = ggplot2::element_line(linetype = "solid", colour = "white"))
+
+    ggplot2::ggsave("Homogeneity.png", graph_2, width = 16, height = 9, units = "cm")
+        }
+}
+
+####Normality of the distribution####
+# Kolmogorov-Smirnov test
+
+ks <- capture.output(ks.test(x = data[, var], y = "pnorm", alternative = "two.sided"))
+
+cat("\nwrite table with Kolmogorov-Smirnov test. \n--> \"", paste(ks, "\"\n", sep = ""), file = "ks.txt", sep = "", append = TRUE)
+
+#Histogramm with distribution line
+graph_hist <- function(data, var1) {
+  graph_hist <- ggplot2::ggplot(data) +
+  ggplot2::geom_histogram(ggplot2::aes_string(x = var1), binwidth = 2, color = "black", fill = "white") +
+  ggplot2::geom_density(ggplot2::aes_string(var1), alpha = 0.12, fill = "red") +
+  ggplot2::ggtitle("Distribution histogram")
+
+return(graph_hist)
+}
+
+#Add the mean dashed line
+add_mean <- function(graph, var1) {
+  graph_mean <- graph + ggplot2::geom_vline(xintercept = mean(data[, var1]),
+              color = "midnightblue", linetype = "dashed", size = 1)
+
+return(graph_mean)
+}
+
+#Adding a QQplot
+graph_qqplot <- function(data, var1) {
+  graph2 <- ggpubr::ggqqplot(data, var1, color = "midnightblue") + ggplot2::ggtitle("Q-Q plot")
+
+return(graph2)
+}
+
+#On suppose que les données sont distribuées normalement lorsque les points suivent approximativement la ligne de référence à 45 degrés.
+
+graph_fin <- function(graph1, graph2) {
+  graph <- cowplot::plot_grid(graph1, graph2, ncol = 2, nrow = 1)
+
+  ggplot2::ggsave("Normal_distribution.png", graph, width = 10, height = 7, units = "cm")
+}
+
+mult <- ifelse(length(unique(data[, colspe])) == 2, FALSE, TRUE)
+homog_var(data, col1 = coldate, col2 = colspe, col3 = colvar, mult = mult)
+
+graph_hist1 <- graph_hist(data, var1 = colvar)
+graph_mean <- add_mean(graph = graph_hist1, var1 = colvar)
+graph_fin(graph1 = graph_mean, graph2 = graph_qqplot(data, var1 = colvar))
diff -r 000000000000 -r 726a387cfdc2 graph_lcbd.r
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/graph_lcbd.r	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,225 @@
+#Rscript
+
+#########################
+##    Beta diversity   ##
+#########################
+
+#####Packages : ggplot2
+#               vegan
+#               adespatial
+#               dplyr
+#               tibble
+#               tdyr
+
+#####Load arguments
+
+args <- commandArgs(trailingOnly = TRUE)
+
+if (length(args) < 2) {
+    stop("This tool needs at least 2 arguments")
+}else{
+    table <- args[1]
+    hr <- args[2]
+    abund <- as.numeric(args[3])
+    loc <- as.numeric(args[4])
+    spe <- as.numeric(args[5])
+    date <- as.numeric(args[6])
+    map <- as.logical(args[7])
+    sepa <- as.logical(args[8])
+    not <- as.logical(args[9])
+    lat <- as.numeric(args[10])
+    long <- as.numeric(args[11])
+    var <- as.numeric(args[12])
+    source(args[13])
+}
+
+if (hr == "false") {
+  hr <- FALSE
+}else{
+  hr <- TRUE
+}
+
+#####Import data
+data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8")
+colabund <- colnames(data)[abund]
+colloc <- colnames(data)[loc]
+if (map) {
+  collat <- colnames(data)[lat]
+  collong <- colnames(data)[long]
+}
+colspe <- colnames(data)[spe]
+coldate <- colnames(data)[date]
+data[, coldate] <- as.factor(data[, coldate])
+
+data <- data[grep("^$", data[, spe], invert = TRUE), ]
+
+if (sepa) {
+colvar <- colnames(data)[var]
+}
+
+# Data for species
+data_num <- make_table_analyse(data, colabund, colspe, colloc, coldate)
+nb_spe <- length(unique(data[, spe]))
+nb_col <- ncol(data_num) - nb_spe + 1
+
+#Data with coordinates and environmental
+if (map) {
+  data_xy <- data_num[, c(collat, collong)]
+  colnames(data_xy) <- c("latitude", "longitude")
+  # Data for environment
+  data_env <- data_num[, c(colloc, collat, collong)]
+  colnames(data_env) <- c("site", "latitude", "longitude")
+}
+
+# Data with only species and their abundance
+data_spe <- data_num[, nb_col:ncol(data_num)]
+rownames(data_spe) <- paste0(data_num[, colloc], " - ", data_num[, coldate])
+
+#####Your analysis
+
+# Computation beta.div {adespatial}
+# Beta.div on Hellinger-transformed species data
+data_beta <- adespatial::beta.div(data_spe, method = "hellinger", nperm = 9999)
+
+save(data_beta, file = "beta_diversity.Rdata")
+cat("##############################################################################",
+    "\n########################### Beta Diversity Summary ###########################",
+    "\n##############################################################################",
+    "\n\n### All data ###",
+    "\nBeta diversity: ", data_beta$beta[[2]],
+    "\nSum of Squares: ", data_beta$beta[[1]],
+    "\n\n### Vector of Local Contributions to Beta Diversity (LCBD) for the sites each date ###",
+    "\n", capture.output(data_beta$LCBD),
+    "\n\n### Vector of P-values associated with the LCBD indices ###",
+    "\n", capture.output(data_beta$p.LCBD),
+    "\n\n### Vector of Corrected P-values for the LCBD indices, Holm correction ###",
+    "\n", capture.output(data_beta$p.adj),
+    "\n\n### Vector of Species contributions to beta diversity (SCBD) ###",
+    "\n", capture.output(data_beta$SCBD), file = "LCBD.txt", fill = 1, append = TRUE)
+
+# Which species have a SCBD larger than the mean SCBD?
+scbd <- capture.output(data_beta$SCBD[data_beta$SCBD >= mean(data_beta$SCBD)])
+write(scbd, "SCBD.txt")
+
+##1st fonction
+beta_div_ext <- function(data_beta, data_xy, data_env) {
+   data_beta_ext <- data.frame(data_xy, data_env, LCBD = data_beta$LCBD * 100, p.LCBD = data_beta$p.LCBD, signif = data_beta$p.LCBD < 0.05)
+
+  graph_beta_ext <- ggplot2::ggplot(data = data_beta_ext, ggplot2::aes(x = latitude, y = longitude, size = LCBD, col = signif)) +
+  ggplot2::geom_point() +
+  ggplot2::scale_colour_manual(values = c("#57bce0", "#ce0b0b"), labels = c("Non significant", "Significant"), name = "Significance at 0.05") +
+  ggplot2::xlab("Longitude") + ggplot2::ylab("Latitude")
+
+  ggplot2::ggsave("Beta_diversity_through_space.png", graph_beta_ext)
+}
+
+## Boyé et al. 2017 JSR Fig R
+####################################################
+
+####LCBD####
+lcbd_site <- adespatial::beta.div(data_spe, "hellinger", nperm = 999)
+
+compute_lcbd <- function(data_beta, data_spe, data_num) {
+
+#############
+  mat_lcbd_site <- data.frame(data_spe, LCBD = data_beta$LCBD * 100, p.LCBD = data_beta$p.LCBD, signif = data_beta$p.LCBD < 0.05, site = data_num[, colloc], date = data_num[, coldate])
+
+## Map spatio-temp
+##################
+  p1 <- ggplot2::qplot(date, site, size = LCBD, col = signif, data = mat_lcbd_site)
+  p1 <- p1 + ggplot2::scale_colour_manual(values = c("#57bce0", "#ce0b0b"), labels = c("Non significant", "Significant"), name = "Significance at 0.05")
+  p1 <- p1 + ggplot2::theme_bw() + ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 90)) + ggplot2::xlab("Date") + ggplot2::ylab("Site")
+
+  ggplot2::ggsave("LCBD_sites_time.png", p1)
+
+
+## Par années
+#############
+  mean_time <- tapply(mat_lcbd_site$LCBD, mat_lcbd_site$date, mean)
+  sd_time <- tapply(mat_lcbd_site$LCBD, mat_lcbd_site$date, sd)
+  date <- unique(mat_lcbd_site$date)
+
+  data <- data.frame(date, mean_time, sd_time)
+
+  time <- ggplot2::ggplot() + ggplot2::geom_pointrange(ggplot2::aes(x = date, y = mean_time, ymin = mean_time - sd_time, ymax = mean_time + sd_time), data = data)
+  time <- time + ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 90), axis.line.y = ggplot2::element_line(size = 0.5)) + ggplot2::ylab("mean LCBD")
+
+  ggplot2::ggsave("Mean_LCBD_through_time.png", time)
+}
+
+## Choose another graph
+#######################
+compute_lcbd2 <- function(data_beta, data_spe, data_num) {
+
+#############
+  mat_lcbd_site <- data.frame(data_spe, LCBD = data_beta$LCBD * 100, p.LCBD = data_beta$p.LCBD, signif = data_beta$p.LCBD < 0.05, site = data_num[, colloc], date = data_num[, coldate], variable = data_num[, colvar])
+
+  p1 <- ggplot2::qplot(date, variable, size = LCBD, col = signif, data = mat_lcbd_site)
+  p1 <- p1 + ggplot2::scale_colour_manual(values = c("#57bce0", "#ce0b0b"), labels = c("Non significant", "Significant"), name = "Significance at 0.05")
+  p1 <- p1 + ggplot2::theme_bw() + ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 90)) + ggplot2::xlab("Date") + ggplot2::ylab(colvar)
+
+  ggplot2::ggsave(paste0("LCBD_per_", colvar, "_through_time.png"), p1)
+}
+
+####SCBD###
+# Function to compute SCBD
+library(dplyr)
+make_scbd_uvc <- function(data_spe, z, data_beta) {
+  # Computation using beta.div {adespatial} on
+  # Hellinger-transformed species data
+
+  # Which species have a SCBD larger than the mean SCBD?
+  spe_scbd <-  data_beta$SCBD[data_beta$SCBD >= mean(data_beta$SCBD)] %>%
+    as.data.frame() %>%
+    tibble::rownames_to_column(var = "Taxon") %>%
+    dplyr::mutate("Methode" = z)
+
+  return(spe_scbd)
+}
+
+# Function to make a radar plot
+
+coord_radar <- function(theta = "x", start = 0, direction = 1) {
+  theta <- match.arg(theta, c("x", "y"))
+  r <- if (theta == "x") "y" else "x"
+  ggplot2::ggproto("CordRadar", ggplot2::coord_polar(theta = theta, start = start,
+          direction = sign(direction)),
+          is_linear = function(coord) TRUE)
+}
+
+# Make the radar plot
+radar_plot <- function(scbd_uvc_tc) {
+  uvc_rd_plot_data <- scbd_uvc_tc %>%
+    rename(scbd_score = ".")
+
+  rad_uvc <- ggplot2::ggplot(uvc_rd_plot_data, ggplot2::aes(x = Taxon, y = scbd_score, group = Methode)) +
+    ggplot2::geom_line() +
+    ggplot2::geom_point(size = 3) +
+    coord_radar() +
+    ggplot2::theme_bw() +
+    ggplot2::theme(axis.text.x = ggplot2::element_text(size = 10),
+        legend.position = "bottom")
+
+  ggplot2::ggsave("SCBD_Species_Radar_plot.png", rad_uvc)
+}
+
+## LCBD
+
+if (map) {
+  #Beta diversity
+  beta_div_ext(data_beta, data_xy, data_env)
+}
+
+#Lcbd per places and time
+compute_lcbd(data_beta, data_spe, data_num)
+
+#Lcbd of your choice
+if (sepa) {
+  compute_lcbd2(data_beta, data_spe, data_num)
+}
+
+##SCBD
+
+scbd_uvc_tc <- make_scbd_uvc(data_spe, z = "TC", data_beta)
+
+radar_plot(scbd_uvc_tc)
diff -r 000000000000 -r 726a387cfdc2 graph_link_var.r
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/graph_link_var.r	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,296 @@
+#Rscript
+
+################################################
+##    Link between variables and themselves   ##
+################################################
+
+#####Packages : ggplot2
+#               Cowplot
+#               Car
+#               faraway
+#               dplyr
+#               GGally
+#               FactoMiner
+#               factoextra
+#               ggcorrplot
+
+#####Load arguments
+
+args <- commandArgs(trailingOnly = TRUE)
+
+if (length(args) == 0) {
+    stop("This tool needs at least one argument")
+}else{
+    table <- args[1]
+    hr <- args[2]
+    colli <- as.logical(args[3])
+    vif <- as.logical(args[4])
+    pca <- as.logical(args[5])
+    interr <- as.logical(args[6])
+    auto <- as.logical(args[7])
+    spe <- as.numeric(args[8])
+    col <- as.numeric(strsplit(args[9], ",")[[1]])
+    var <- as.numeric(args[10])
+    var2 <- as.numeric(args[11])
+    var4 <- as.numeric(args[12])
+}
+
+if (hr == "false") {
+  hr <- FALSE
+}else{
+  hr <- TRUE
+}
+
+if (length(col) == 1) {
+stop("Please select two or more numerical columns")
+}
+
+#####Import data
+data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8")
+if (vif | pca) {
+data_active <- data[col]
+#Define the active individuals and the active variables for the PCA
+}
+
+if (colli | interr) {
+colspe <- colnames(data)[spe]
+}
+
+if (colli) {
+data_num <- data[col]
+data_num$species <- data[, spe]
+data_num <- data_num[grep("^$", data_num$spe, invert = TRUE), ]
+}
+
+if (interr | auto) {
+colvar <- colnames(data)[var]
+}
+
+if (interr) {
+colvar2 <- colnames(data)[var2]
+colvar4 <- colnames(data)[var4]
+}
+
+#####Your analysis
+
+####Independence of the observations####
+
+acf_tb <- function(data, var) {
+obj <- acf(data[, var], na.action = na.pass)
+  return(obj)
+}
+
+acf_df <- function(data, var) {
+
+tb <- data.frame(acf = acf_tb(data, var)$acf, lag = acf_tb(data, var)$lag)
+
+  return(tb) # Lag: intervalle temporel entre mesures, fréquence à laquelle on mesure l'auto corrélation.
+# ACF: indépendance temporelle
+}
+
+autocorr <- function(var1, var2) {
+  cat("\nACF\n", var2$acf, file = "acf.txt", fill = 1, append = TRUE)
+  graph <- ggplot2::ggplot() +
+  ggplot2::geom_bar(ggplot2::aes(x = var2$lag, y = var2$acf), stat = "identity", position = "identity", fill = "midnightblue") +
+  ggplot2::geom_hline(mapping = ggplot2::aes(yintercept = qnorm((1 + 0.95) / 2) / sqrt(var1$n.used)),
+             linetype = "dashed") + # calcul interval de confiance à 95% sans correction du bruit blanc.
+  ggplot2::geom_hline(mapping = ggplot2::aes(yintercept = -qnorm((1 + 0.95) / 2) / sqrt(var1$n.used)), linetype = "dashed") + ggplot2::labs(title = "Autocorrelation") + ggplot2::xlab("lag") + ggplot2::ylab("acf")
+  ggplot2::theme(plot.title = ggplot2::element_text(hjust = 0.5))
+
+  ggplot2::ggsave("autocorrelation.png", graph)
+}
+
+####Interractions####
+
+graph <- function(data, var1, var2, var3) {
+  graph <- ggplot2::ggplot(data, ggplot2::aes_string(x = var1, y = var2, group = var3, color = var3)) +
+  ggplot2::geom_point() +
+  ggplot2::geom_smooth(method = lm, se = FALSE) +
+  ggplot2::theme(plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold"))
+
+return(graph)
+}
+
+# Put multiple panels
+interraction <- function(data, var1, var2, var3, var4) {
+  cat("\nSpecies\n", spe, file = "Species.txt", fill = 1, append = TRUE)
+  if (mult1) {
+      for (spe in unique(data[, var3])) {
+      data_cut <- data[data[, var3] == spe, ]
+      mult_graph <- graph(data_cut, var1, var2, var3) + ggplot2::facet_grid(cols = ggplot2::vars(data_cut[, var4]), scales = "free") +
+      cowplot::background_grid(major = "xy", minor = "none") +
+      cowplot::panel_border() + ggplot2::ggtitle("Interactions")
+
+      ggplot2::ggsave(paste("interaction_of_", spe, ".png"), mult_graph, width = 10, height = 7)
+      }
+    }else{
+    mult_graph <- graph(data, var1, var2, var3) + ggplot2::facet_grid(rows = ggplot2::vars(data[, var3]), cols = ggplot2::vars(data[, var4]), scales = "free") +
+    cowplot::background_grid(major = "xy", minor = "none") +
+    cowplot::panel_border() + ggplot2::ggtitle("Interactions")
+
+    ggplot2::ggsave("interraction.png", mult_graph)
+  }
+}
+
+####Collinearity among covariates####
+# Create the plots
+
+coli <- function(data, var) {
+  if (mult2) {
+    cat("\nThere is not enough data on these species they appear too few times in the tabular-file\n", file = "Data.txt", fill = 1, append = TRUE)
+    for (spe in unique(data$species)) {
+      nb_spe <- sum(data$species == spe)
+      if (nb_spe <= 2) {
+      cat(spe, file = "Data.txt", fill = 1, append = TRUE)
+      }else{
+      data_cut <- data[data$species == spe, ]
+      nb <- ncol(data_cut)
+      data_num <- data_cut[, -nb]
+      graph <- GGally::ggpairs(data_num, ggplot2::aes(color = data_cut$species),
+      lower = list(continuous = "points"), axisLabels = "internal")
+
+      ggplot2::ggsave(paste0("collinarity_of_", spe, ".png"), graph, width = 20, height = 15)
+      }
+  }
+
+  }else{
+    nb <- ncol(data)
+    data_cut <- data[, -nb]
+    graph <- GGally::ggpairs(data_cut, ggplot2::aes(color = data[, var]),
+    lower = list(continuous = "points"), axisLabels = "internal") +
+  ggplot2::scale_colour_manual(values = c("#00AFBB", "#E7B800", "#FC4E07")) +
+  ggplot2::scale_fill_manual(values = c("#00AFBB", "#E7B800", "#FC4E07"))
+
+  ggplot2::ggsave("collinarity.png", graph)
+  }
+}
+
+####PCA method####
+
+plot_pca <- function(data) {
+  #Correlation circle
+  graph_corr <- factoextra::fviz_pca_var(active_data(data), col.var = "cos2",
+                           gradient.cols = c("#00AFBB", "#E7B800", "#FC4E07"),
+                           repel = TRUE #Avoid text overlap
+                           )
+  ggplot2::ggsave("Pca_circle.png", graph_corr)
+}
+
+plot_qual <- function(data) {
+  #PCA results for variables
+  var <- factoextra::get_pca_var(active_data(data))
+
+  #representation quality
+  graph_quality <- ggcorrplot::ggcorrplot(var$cos2[!apply(var$cos2, 1, anyNA), ], method = "circle",
+  ggtheme = ggplot2::theme_gray,
+  colors = c("#00AFBB", "#E7B800", "#FC4E07"))
+
+  ggplot2::ggsave("Pca_quality.png", graph_quality)
+}
+
+#### Variance inflation factor ####
+
+myvif <- function(mod) {
+  v <- vcov(mod)
+  assign <- attributes(model.matrix(mod))$assign
+  if (names(coefficients(mod)[1]) == "(Intercept)") {
+    v <- v[-1, -1]
+    assign <- assign[-1]
+  } else warning("No intercept: vifs may not be sensible.")
+  terms <- labels(terms(mod))
+  n_terms <- length(terms)
+  if (n_terms < 2) stop("The model contains fewer than 2 terms")
+  if (length(assign) > dim(v)[1]) {
+     diag(tmp_cor) <- 0
+     if (any(tmp_cor == 1.0)) {
+        return("Sample size is too small, 100% collinearity is present")
+     } else {
+        return("Sample size is too small")
+     }
+  }
+  r <- cov2cor(v)
+  detr <- det(r)
+  result <- matrix(0, n_terms, 3)
+  rownames(result) <- terms
+  colnames(result) <- c("GVIF", "Df", "GVIF^(1/2Df)")
+  for (term in 1:n_terms) {
+    subs <- which(assign == term)
+    result[term, 1] <- det(as.matrix(r[subs, subs])) * det(as.matrix(r[-subs, -subs])) / detr
+    result[term, 2] <- length(subs)
+  }
+  if (all(result[, 2] == 1)) {
+    result <- data.frame(GVIF = result[, 1])
+  } else {
+    result[, 3] <- result[, 1] ^ (1 / (2 * result[, 2]))
+  }
+  invisible(result)
+}
+corvif1 <- function(dataz) {
+    dataz <- as.data.frame(dataz)
+    #correlation part
+    tmp_cor <- cor(dataz, use = "complete.obs")
+    return(tmp_cor)
+}
+corvif2 <- function(dataz) {
+    dataz <- as.data.frame(dataz)
+    #vif part
+    form    <- formula(paste("fooy ~ ", paste(strsplit(names(dataz), " "), collapse = " + ")))
+    dataz   <- data.frame(fooy = 1, dataz)
+    lm_mod  <- lm(form, dataz)
+
+    return(myvif(lm_mod))
+}
+
+#Autocorrelation
+if (auto) {
+obj1 <- acf_tb(data, var = colvar)
+obj2 <- acf_df(data, var = colvar)
+autocorr(var1 = obj1, var2 = obj2)
+}
+
+if (interr) {
+#Interractions
+mult1 <- ifelse(length(unique(data[, colspe])) <= 6, FALSE, TRUE)
+interraction(data, var1 = colvar, var2 = colvar2, var3 = colspe, var4 = colvar4)
+}
+
+#Collinearity
+if (colli) {
+mult2 <- ifelse(length(unique(data[, spe])) < 3, FALSE, TRUE)
+coli(data = data_num, var = spe)
+}
+
+#PCA
+if (pca) {
+active_data <- function(data) {
+  #Calcul of PCA for the active data
+  res_pca <- FactoMineR::PCA(data, graph = FALSE)
+
+return(res_pca)
+}
+
+#eigenvalue
+eig_val <- capture.output(factoextra::get_eigenvalue(active_data(data_active)))
+
+cat("\nwrite table with eigenvalue. \n--> \"", paste(eig_val, "\"\n", sep = ""), file = "valeurs.txt", sep = "", append = TRUE)
+
+plot_pca(data_active)
+plot_qual(data_active)
+}
+
+#VIF
+if (vif) {
+#Compute 2 tables#
+tb_corr <- as.data.frame(corvif1(dataz = data_active))
+tb_corr <- cbind(x = rownames(tb_corr), tb_corr)
+tb_vif <- corvif2(dataz = data_active)
+
+write.table(tb_corr, "corr.tabular", row.names = FALSE, quote = FALSE, sep = "\t", dec = ".", fileEncoding = "UTF-8")
+
+if (all(is.na(tb_vif))) {
+  tb_vif <- NULL
+  cat("Vif couldn't be calculated, selected data isn't correlated")
+}else{
+write.table(tb_vif, "vif.tabular", row.names = FALSE, quote = FALSE, sep = "\t", dec = ".", fileEncoding = "UTF-8")
+}
+}
diff -r 000000000000 -r 726a387cfdc2 graph_pres_abs_abund.r
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/graph_pres_abs_abund.r	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,195 @@
+#Rscript
+
+#########################################################
+##    Presence abscence and abundance in environment   ##
+#########################################################
+
+#####Packages : ggplot2
+#               vegan
+
+#####Load arguments
+
+args <- commandArgs(trailingOnly = TRUE)
+
+if (length(args) < 5) {
+    stop("This tool needs at least 5 arguments")
+}else{
+    table <- args[1]
+    hr <- args[2]
+    abundance <- as.logical(args[3])
+    presabs <- as.logical(args[4])
+    rarefaction <- as.logical(args[5])
+    lat <- as.numeric(args[6])
+    long <- as.numeric(args[7])
+    ind <- as.character(args[8])
+    loc <- as.numeric(args[9])
+    num <- as.character(args[10])
+    spe <- as.numeric(args[11])
+    abond <- as.numeric(args[12])
+}
+
+if (hr == "false") {
+  hr <- FALSE
+}else{
+  hr <- TRUE
+}
+
+#####Import data
+data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8")
+
+if (abundance) {
+collat <- colnames(data)[lat]
+collong <- colnames(data)[long]
+}
+
+if (presabs) {
+colloc <- colnames(data)[loc]
+}
+
+if (presabs | rarefaction | abundance) {
+colabond <- colnames(data)[abond]
+colspe <- colnames(data)[spe]
+data <- data[grep("^$", data[, colspe], invert = TRUE), ]
+}
+
+#####Your analysis
+
+####The abundance in the environment####
+
+##Representation of the environment##
+
+## Mapping
+graph_map <- function(data, collong, collat, colabond, ind, colspe) {
+  cat("\nCoordinates range\n\nLatitude from ", min(data[, collat], na.rm = TRUE), " to ", max(data[, collat], na.rm = TRUE), "\nLongitude from ", min(data[, collong], na.rm = TRUE), " to ", max(data[, collong], na.rm = TRUE), file = "Data_abund.txt", fill = 1, append = TRUE)
+  if (mult0) {
+    mappy <- ggplot2::ggplot(data, ggplot2::aes_string(x = collong, y = collat, cex = colabond, color = colspe)) +
+    ggplot2::geom_point() + ggplot2::ggtitle(paste("Abundance of", ind, "in the environment")) + ggplot2::xlab("Longitude") + ggplot2::ylab("Latitude")  + ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), legend.text = ggplot2::element_text(size = 8)) + ggplot2::guides(cex = ggplot2::guide_legend(reverse = TRUE))
+
+  }else{
+    mappy <- ggplot2::ggplot(data, ggplot2::aes_string(x = collong, y = collat, cex = colabond, color = colabond)) +
+    ggplot2::geom_point() + ggplot2::ggtitle(paste("Abundance of", ind, "in the environment")) + ggplot2::xlab("Longitude") + ggplot2::ylab("Latitude")  + ggplot2::theme(axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), legend.text = ggplot2::element_text(size = 8)) + ggplot2::guides(cex = ggplot2::guide_legend(reverse = TRUE))
+  }
+  ggplot2::ggsave("mappy.png", mappy, width = 20, height = 9, units = "cm")
+}
+
+####Presence absence abundance####
+
+## Histogram
+graph_hist <- function(data, col1, col2, col3) {
+  cat("\nLocations\n", unique(data[, col1]), file = "Locations.txt", fill = 1, append = TRUE)
+  if (mult1) {
+    for (loc in unique(data[, col1])) {
+      data_cut <- data[data[, col1] == loc, ]
+      data_cut <- data_cut[data_cut[, col3] > 0, ]
+      if (length(unique(data_cut[, col2])) <= 40) {
+        top <- nrow(data_cut)
+        var <- nchar(as.character(round(top * 0.1, digits = 0)))
+        step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1))
+        graph <- ggplot2::ggplot(data_cut) +
+        ggplot2::geom_bar(ggplot2::aes_string(x = col1, fill = col2)) +
+        ggplot2::scale_y_continuous(breaks = seq(from = 0, to = top, by = step)) +
+        ggplot2::theme(plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold")) +
+        ggplot2::ggtitle("Number of presence")
+
+        ggplot2::ggsave(paste("number_in_", loc, ".png"), graph)
+      }else{
+        cat(paste0("\n", loc, " had more than 40 species and plot isn't readable please select a higher taxon level or cut your data"))
+      }
+    }
+  }else{
+  top <- nrow(data)
+  var <- nchar(as.character(round(top * 0.1, digits = 0)))
+  step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1))
+  graph <- ggplot2::ggplot(data) +
+  ggplot2::geom_bar(ggplot2::aes_string(x = col1, fill = col2)) +
+  ggplot2::scale_y_continuous(breaks = seq(from = 0, to = top, by = step)) +
+  ggplot2::theme(plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold")) +
+  ggplot2::ggtitle("Number of individuals")
+
+  ggplot2::ggsave("number.png", graph)
+  }
+}
+
+rare <- function(data, spe, abond, rare, num) {
+# Put the data in form
+  new_data <- as.data.frame(data[, spe])
+  colnames(new_data) <- c("Species")
+  new_data$total <- data[, abond]
+
+  new_data$rarefaction <- as.integer(rare)
+
+  end <- length(unique(new_data$Species))
+  out <- vegan::rarecurve(new_data[, 2:3], step = 10, sample = rarefy_sample, label = FALSE)
+  names(out) <- paste(unique(new_data$Species), sep = "")
+
+# Coerce data into "long" form.
+  protox <- mapply(FUN = function(x, y) {
+    mydf <- as.data.frame(x)
+    colnames(mydf) <- "value"
+    mydf$species <- y
+    mydf$subsample <- attr(x, "Subsample")
+    mydf <- na.omit(mydf)
+    mydf
+  }, x = out, y = as.list(names(out)), SIMPLIFY = FALSE)
+
+  xy <- do.call(rbind, protox)
+  rownames(xy) <- NULL  # pretty
+
+# Plot.
+
+  if (mult2) {
+    for (spe in unique(data[, spe])) {
+      xy_cut <- xy[xy$species == spe, ]
+      top <- max(xy_cut$subsample)
+      var <- nchar(as.character(round(top * 0.1, digits = 0)))
+      step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1))
+      courbe <- ggplot2::ggplot(xy_cut, ggplot2::aes(x = subsample, y = value)) +
+      ggplot2::theme_gray() +
+      ggplot2::geom_line(size = 1) +
+      ggplot2::scale_x_continuous(breaks = seq(from = 0, to = top, by = step)) +
+      ggplot2::xlab("Abundance") + ggplot2::ylab("Value") +
+      ggplot2::ggtitle("rarefaction curve")
+
+      ggplot2::ggsave(paste("rarefaction_of_", spe, ".png"), courbe)
+    }
+  }else{
+    top <- max(xy$subsample)
+    var <- nchar(as.character(round(top * 0.1, digits = 0)))
+    step <- round(top * 0.1, digits = ifelse(var == 1, 1, -var + 1))
+    courbe <- ggplot2::ggplot(xy, ggplot2::aes(x = subsample, y = value, color = species)) +
+    ggplot2::theme_gray() +
+    ggplot2::geom_line(size = 1) +
+    ggplot2::scale_x_continuous(breaks = seq(from = 0, to = top, by = step)) +
+    ggplot2::xlab("Subsample") + ggplot2::ylab("Value") +
+    ggplot2::ggtitle("rarefaction curves")
+
+    ggplot2::ggsave("rarefaction.png", courbe)
+  }
+}
+
+if (abundance) {
+#Maps
+mult0 <- ifelse(length(unique(data[, colspe])) > 10, FALSE, TRUE)
+graph_map(data, collong = collong, collat = collat, colabond = colabond, ind = ind, colspe = colspe)
+}
+
+if (presabs) {
+#Presence absence count
+mult1 <- ifelse(length(unique(data[, colloc])) <= 10, FALSE, TRUE)
+graph_hist(data, col1 = colloc, col2 = colspe, col3 = colabond)
+}
+
+if (rarefaction) {
+#rarefaction
+
+#### rarefaction indice ####
+rarefy_sample <- as.numeric(num)
+
+## Calcul de la rarefaction
+rarefaction <- vegan::rarefy(data[, abond], rarefy_sample)
+
+write.table(rarefaction, "rare.tabular")
+
+mult2 <- ifelse(length(unique(data[, colspe])) <= 30, FALSE, TRUE)
+rare(data, spe = colspe, abond = colabond, rare = rarefaction, num = rarefy_sample)
+}
diff -r 000000000000 -r 726a387cfdc2 graph_stat_presence_abs.r
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/graph_stat_presence_abs.r	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,105 @@
+#Rscript
+
+################################
+##    Median and dispersion   ##
+################################
+
+#####Packages : Cowplot
+#               ggplot2
+
+#####Load arguments
+
+args <- commandArgs(trailingOnly = TRUE)
+
+if (length(args) == 0) {
+    stop("This tool needs at least one argument")
+}else{
+    table <- args[1]
+    hr <- args[2]
+    var <- as.numeric(args[3])
+    spe <- as.numeric(args[4])
+    loc <- as.numeric(args[5])
+    time <- as.numeric(args[6])
+    source(args[7])
+}
+
+if (hr == "false") {
+  hr <- FALSE
+}else{
+  hr <- TRUE
+}
+
+#####Import data
+data <- read.table(table, sep = "\t", dec = ".", header = hr, fill = TRUE, encoding = "UTF-8")
+data <- na.omit(data)
+colvar <- colnames(data)[var]
+colspe <- colnames(data)[spe]
+colloc <- colnames(data)[loc]
+coltime <- colnames(data)[time]
+
+data <- data[grep("^$", data[, spe], invert = TRUE), ]
+
+#####Your analysis
+
+####Median and data dispersion####
+
+#Median
+graph_median <- function(data, var) {
+  graph_median <- ggplot2::ggplot(data, ggplot2::aes_string(y = var)) +
+  ggplot2::geom_boxplot(color = "darkblue") +
+  ggplot2::theme(legend.position = "none") + ggplot2::ggtitle("Median")
+
+return(graph_median)
+
+}
+
+#Dispersion
+dispersion <- function(data, var, var2) {
+  graph_dispersion <- ggplot2::ggplot(data) +
+  ggplot2::geom_point(ggplot2::aes_string(x = var2, y = var, color = var2)) +
+  ggplot2::scale_fill_brewer(palette = "Set3") +
+  ggplot2::theme(legend.position = "none", axis.text.x = ggplot2::element_text(angle = 90, vjust = 0.5, hjust = 1), plot.title = ggplot2::element_text(color = "black", size = 12, face = "bold")) + ggplot2::ggtitle("Dispersion")
+
+return(graph_dispersion)
+
+}
+
+#The 2 graph
+med_disp <- function(med, disp) {
+  graph <- cowplot::plot_grid(med, disp, ncol = 1, nrow = 2, vjust = -5,  scales = "free")
+
+  ggplot2::ggsave("Med_Disp.png", graph, width = 12, height = 20, units = "cm")
+}
+
+
+#### Zero problem in data ####
+
+#Put data in form
+
+data_num <- make_table_analyse(data, colvar, colspe, colloc, coltime)
+nb_spe <- length(unique(data[, spe]))
+nb_col <- ncol(data_num) - nb_spe + 1
+data_num <- data_num[, nb_col:ncol(data_num)]
+
+#Presence of zeros in the data
+mat_corr <- function(data) {
+  cor(data)
+}
+p_mat <- function(data) {
+  ggcorrplot::cor_pmat(data)
+} # compute a matrix of correlation p-values
+
+graph_corr <- function(data_num) {
+  graph <- ggcorrplot::ggcorrplot(mat_corr(data_num), method = "circle", p.mat = p_mat(data_num), #barring the no significant coefficient
+  ggtheme = ggplot2::theme_gray, colors = c("#00AFBB", "#E7B800", "#FC4E07"))
+
+  ggplot2::ggsave("0_pb.png", graph)
+}
+
+##Med and disp
+med <- graph_median(data, var = colvar)
+disp <- dispersion(data, var = colvar, var2 = colspe)
+med_disp(med = med, disp = disp)
+
+##O problem
+graph_corr(data_num)
diff -r 000000000000 -r 726a387cfdc2 macro.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macro.xml	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,65 @@
+<macros>
+    <token name="@VERSION@">0.0.0</token>
+    <xml name="Explo_requirements">
+        <requirements>
+           <requirement type="package" version="3.3.3">r-ggplot2</requirement>
+           <yield />
+        </requirements>
+    </xml>
+    <xml name="explo_input">
+       <param name="input" type="data" format="tabular" label="Input table"/>
+       <param name="colnames" type="boolean" label="First line is a header line" checked="true"/>
+    </xml>
+    <xml name="explo_filter_colli">
+        <filter> method['type'] == 'collinearity'</filter>
+    </xml>
+    <xml name="explo_filter_pca">
+        <filter> method['type'] == 'pca'</filter>
+    </xml>
+    <xml name="explo_filter_vif">
+        <filter> method['type'] == 'vif'</filter>
+    </xml>
+    <xml name="explo_filter_interr">
+        <filter> method['type'] == 'interr'</filter>
+    </xml>
+    <xml name="explo_filter_autocorr">
+        <filter> method['type'] == 'autocorr'</filter>
+    </xml>
+    <xml name="explo_filter_abund">
+        <filter> method['type'] == 'abund'</filter>
+    </xml>
+    <xml name="explo_filter_pres_abs">
+        <filter> method['type'] == 'pres_abs'</filter>
+    </xml>
+    <xml name="explo_filter_rare">
+        <filter> method['type'] == 'rare'</filter>
+    </xml>
+    <xml name="explo_bibref">
+       <citations>
+            <citation type="bibtex">
+            @unpublished{
+            title={ A protocol for data exploration to avoid common statistical problems },
+            authors={Alain F. Zuur,  Elena N. Ieno,  Chris S. Elphick},
+            url={https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/j.2041-210X.2009.00001.x}
+            }
+            </citation>
+        </citations>
+    </xml>
+    <xml name="book_bibref">
+        <citations>
+            <citation type="bibtex">
+            @unpublished{
+            title={ Numerical Ecology with R },
+            author={Daniel Borcard, François Gillet, Pierre Legendre},
+            }
+            </citation>
+        </citations>
+    </xml>
+    <xml name="topic">
+        <edam_topics>
+           <edam_topic>topic_0610</edam_topic>
+           <edam_topic>topic_3050</edam_topic>
+        </edam_topics>
+    </xml>
+</macros>
+
diff -r 000000000000 -r 726a387cfdc2 test-data/Data.tabular
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Data.tabular	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,2 @@
+"x"
+"1" 29
diff -r 000000000000 -r 726a387cfdc2 test-data/Missing_species.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Missing_species.txt	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,6 @@
+
+There is not enough data on these species they appear too few times in the tabular-file
+
+Scorpaenidae
+Plesiopidae
+Serranidae
diff -r 000000000000 -r 726a387cfdc2 test-data/Reel_life_survey_fish_modif.tabular
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Reel_life_survey_fish_modif.tabular	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,290 @@
+FID	Key	SurveyID	Country	Ecoregion	Realm	SiteCode	Site	SiteLat	SiteLong	SurveyDate	Depth	Phylum	Class	Family	Taxon	Block	Total	Diver	geom
+M2_FISH_DATA.1	1	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	2	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.2	2	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	5	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.3	3	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	8	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.4	4	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	6	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.5	5	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	9	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.6	6	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	1	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.7	7	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	2	19	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.8	8	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon histrio	1	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.9	9	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon histrio	2	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.10	10	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon sp. [3 GA]	1	12	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.11	11	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon spp.	2	5	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.12	12	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Scorpaenidae	Parascorpaena aurita	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.13	13	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Tripterygiidae	Ucla xenogrammus	1	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.14	14	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Tripterygiidae	Ucla xenogrammus	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.15	15	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Plesiopidae	Assessor macneilli	2	20	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.16	16	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	4	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.17	17	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.18	18	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	5	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.19	19	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	6	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.20	20	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.21	21	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.22	22	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.23	23	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Serranidae	Epinephelus fasciatus	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.24	24	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	6	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.25	25	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	8	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.26	26	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	1	7	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.27	27	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	2	12	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.28	28	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Gobiodon sp. [3 GA]	2	16	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.29	29	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Gobiodon spp.	2	7	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.30	30	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Paragobiodon echinocephalus	2	2	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.31	31	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis clathrata	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.32	32	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Apogonidae	Apogon spp.	1	1	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.33	33	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Serranidae	Diploprion bifasciatum	1	1	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.34	34	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	5	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.35	35	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Gobiodon histrio	1	1	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.36	36	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	2	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.37	37	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	2	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.38	38	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Salarias spp.	1	1	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.39	39	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	3	PBD	POINT (151.75 -23.53)
+M2_FISH_DATA.40	40	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	2	3	PBD	POINT (151.75 -23.53)
+M2_FISH_DATA.41	41	912345712	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Valenciennea decora	2	2	PBD	POINT (151.75 -23.53)
+M2_FISH_DATA.42	42	912345713	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8.1	Chordata	Actinopterygii	Apogonidae	Apogon spp.	1	1	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.43	43	912345713	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	3	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.44	44	912345713	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	6	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.45	45	912345713	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8.1	Chordata	Actinopterygii	Muraenidae	Gymnothorax spp.	1	1	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.46	46	912345713	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	7	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.47	47	912345713	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2015-10-01T14:00:00Z	8.1	Chordata	Actinopterygii	Plesiopidae	Assessor macneilli	2	2	PBD	POINT (151.75 -23.53)
+M2_FISH_DATA.48	48	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Amblygobius phalaena	2	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.49	49	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Atrosalarias holomelas	1	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.50	50	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Apogonidae	Cheilodipterus quinquelineatus	1	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.51	51	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	3	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.52	52	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.53	53	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Serranidae	Epinephelus merra	1	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.54	54	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	3	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.55	55	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	2	8	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.56	56	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Opistognathidae	Opistognathus spp.	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.57	57	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	4	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.58	58	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	2	3	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.59	59	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Holocentridae	Sargocentron rubrum	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.60	60	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Valenciennea longipinnis	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.61	61	912347130	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Valenciennea muralis	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.62	62	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Amblyeleotris wheeleri	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.63	63	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Amblygobius phalaena	1	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.64	64	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Amblygobius phalaena	2	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.65	65	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Apogonidae	Cheilodipterus quinquelineatus	1	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.66	66	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	3	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.67	67	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	9	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.68	68	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.69	69	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.70	70	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.71	71	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Eviota prasites	2	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.72	72	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	6	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.73	73	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	2	7	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.74	74	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Opistognathidae	Opistognathus spp.	1	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.75	75	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Opistognathidae	Opistognathus spp.	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.76	76	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	2	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.77	77	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.78	78	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis queenslandica	1	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.79	79	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis queenslandica	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.80	80	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Holocentridae	Sargocentron rubrum	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.81	81	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Valenciennea longipinnis	2	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.82	82	912347131	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS2	Masthead Site 1	-23.53	151.75	2017-03-10T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Valenciennea muralis	1	1	CK	POINT (151.75 -23.53)
+M2_FISH_DATA.83	83	912345714	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS3	Masthead Site 2	-23.53	151.75	2015-10-02T14:00:00Z	7	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius mirabilis	1	3	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.84	84	912345714	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS3	Masthead Site 2	-23.53	151.75	2015-10-02T14:00:00Z	7	Chordata	Actinopterygii	Gobiidae	Eviota spp.	1	4	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.85	85	912345714	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS3	Masthead Site 2	-23.53	151.75	2015-10-02T14:00:00Z	7	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	2	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.86	86	912345714	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS3	Masthead Site 2	-23.53	151.75	2015-10-02T14:00:00Z	7	Chordata	Actinopterygii	Gobiidae	Eviota spp.	2	5	PBD	POINT (151.75 -23.53)
+M2_FISH_DATA.87	87	912345715	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS3	Masthead Site 2	-23.53	151.75	2015-10-02T14:00:00Z	7.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius mirabilis	1	13	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.88	88	912345715	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS3	Masthead Site 2	-23.53	151.75	2015-10-02T14:00:00Z	7.1	Chordata	Actinopterygii	Gobiidae	Eviota spp.	1	2	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.89	89	912345715	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS3	Masthead Site 2	-23.53	151.75	2015-10-02T14:00:00Z	7.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	1	ATC	POINT (151.75 -23.53)
+M2_FISH_DATA.90	90	912345716	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	2	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.91	91	912345716	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5	Chordata	Actinopterygii	Pseudochromidae	Labracinus cyclophthalmus	1	2	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.92	92	912345716	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	2	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.93	93	912345716	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5	Chordata	Actinopterygii	Blenniidae	Blenniid spp.	2	1	PBD	POINT (151.77 -23.5)
+M2_FISH_DATA.94	94	912345716	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	2	1	PBD	POINT (151.77 -23.5)
+M2_FISH_DATA.95	95	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Serranidae	Diploprion bifasciatum	1	1	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.96	96	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	1	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.97	97	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	3	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.98	98	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Pseudochromidae	Labracinus cyclophthalmus	1	1	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.99	99	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	1	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.100	100	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis hexophtalma	1	1	ATC	POINT (151.77 -23.5)
+M2_FISH_DATA.101	101	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	2	5	PBD	POINT (151.77 -23.5)
+M2_FISH_DATA.102	102	912345717	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2015-10-03T14:00:00Z	5.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis stricticeps	2	1	PBD	POINT (151.77 -23.5)
+M2_FISH_DATA.103	103	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Amblygobius phalaena	1	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.104	104	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Blenniidae	Atrosalarias holomelas	2	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.105	105	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Apogonidae	Cheilodipterus quinquelineatus	1	4	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.106	106	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	5	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.107	107	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	9	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.108	108	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	2	22	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.109	109	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	2	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.110	110	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.111	111	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Eviota prasites	2	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.112	112	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	23	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.113	113	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	2	29	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.114	114	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Pinguipedidae	Parapercis australis	1	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.115	115	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Pinguipedidae	Parapercis xanthozona	1	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.116	116	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Valenciennea longipinnis	1	8	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.117	117	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Valenciennea longipinnis	2	13	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.118	118	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Valenciennea muralis	1	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.119	119	912347120	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5	Chordata	Actinopterygii	Gobiidae	Valenciennea muralis	2	2	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.120	120	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	2	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.121	121	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	17	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.122	122	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	21	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.123	123	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	1	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.124	124	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	2	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.125	125	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	2	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.126	126	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	15	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.127	127	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	3	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.128	128	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	6	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.129	129	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Eviota prasites	2	2	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.130	130	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Eviota sebreei	2	1	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.131	131	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	30	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.132	132	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	2	13	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.133	133	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Plagiotremus laudandus	1	2	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.134	134	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Blenniidae	Plagiotremus laudandus	2	2	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.135	135	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Valenciennea longipinnis	1	12	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.136	136	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Valenciennea longipinnis	2	3	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.137	137	912347121	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS4	Erskyne Island Site 1	-23.5	151.77	2017-03-09T13:00:00Z	5.1	Chordata	Actinopterygii	Gobiidae	Valenciennea muralis	2	6	CK	POINT (151.77 -23.5)
+M2_FISH_DATA.138	138	912345718	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2015-10-03T14:00:00Z	6	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	6	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.139	139	912345718	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2015-10-03T14:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon histrio	1	2	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.140	140	912345719	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2015-10-03T14:00:00Z	6.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	3	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.141	141	912345719	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2015-10-03T14:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Gobiodon histrio	1	3	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.142	142	912345719	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2015-10-03T14:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota spp.	2	8	PBD	POINT (151.78 -23.5)
+M2_FISH_DATA.143	143	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Apogonidae	Apogon capricornis	1	95	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.144	144	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Apogonidae	Apogon capricornis	2	155	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.145	145	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	7	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.146	146	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	9	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.147	147	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	2	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.148	148	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	12	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.149	149	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	5	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.150	150	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Fusigobius neophytus	1	4	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.151	151	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	2	4	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.152	152	912347122	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6.1	Chordata	Actinopterygii	Pempherididae	Parapriacanthus ransonneti	1	225	GJE	POINT (151.78 -23.5)
+M2_FISH_DATA.153	153	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Amblygobius phalaena	1	3	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.154	154	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Apogonidae	Apogon capricornis	1	25	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.155	155	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Apogonidae	Apogon capricornis	2	60	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.156	156	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Atrosalarias holomelas	1	5	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.157	157	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Atrosalarias holomelas	2	3	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.158	158	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Crossosalarias macrospilus	1	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.159	159	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.160	160	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	3	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.161	161	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	2	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.162	162	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.163	163	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.164	164	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota prasites	1	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.165	165	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Muraenidae	Gymnothorax javanicus	1	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.166	166	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	4	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.167	167	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Pempherididae	Parapriacanthus ransonneti	1	85	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.168	168	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Pempherididae	Parapriacanthus ransonneti	2	200	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.169	169	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Pseudochromidae	Pseudochromis fuscus	1	1	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.170	170	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Synodontidae	Synodus variegatus	1	2	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.171	171	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Synodontidae	Synodus variegatus	2	2	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.172	172	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Apogonidae	Taeniamia leai	1	5	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.173	173	912347135	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS5	Erskyne Island Site 2	-23.5	151.78	2017-03-09T13:00:00Z	6	Chordata	Actinopterygii	Apogonidae	Taeniamia leai	2	10	CK	POINT (151.78 -23.5)
+M2_FISH_DATA.174	174	912345720	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	1	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.175	175	912345720	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	5	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.176	176	912345720	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	4	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.177	177	912345720	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7	Chordata	Actinopterygii	Pinguipedidae	Parapercis queenslandica	1	1	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.178	178	912345720	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7	Chordata	Actinopterygii	Holocentridae	Sargocentron rubrum	1	2	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.179	179	912345720	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7	Chordata	Actinopterygii	Pinguipedidae	Parapercis spp.	2	1	PBD	POINT (151.78 -23.5)
+M2_FISH_DATA.180	180	912345721	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	3	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.181	181	912345721	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7.1	Chordata	Actinopterygii	Gobiidae	Istigobius decoratus	1	5	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.182	182	912345721	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7.1	Chordata	Actinopterygii	Holocentridae	Sargocentron rubrum	1	1	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.183	183	912345721	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7.1	Chordata	Actinopterygii	Synodontidae	Synodus variegatus	1	1	ATC	POINT (151.78 -23.5)
+M2_FISH_DATA.184	184	912345721	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7.1	Chordata	Actinopterygii	Gobiidae	Amblygobius phalaena	2	1	PBD	POINT (151.78 -23.5)
+M2_FISH_DATA.185	185	912345721	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7.1	Chordata	Actinopterygii	Pinguipedidae	Parapercis spp.	2	1	PBD	POINT (151.78 -23.5)
+M2_FISH_DATA.186	186	912345721	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS6	Erskyne Island Site 3	-23.5	151.78	2015-10-04T13:00:00Z	7.1	Chordata	Actinopterygii	Synodontidae	Synodus variegatus	2	1	PBD	POINT (151.78 -23.5)
+M2_FISH_DATA.187	187	912345722	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2015-10-04T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	4	ATC	POINT (151.95 -23.25)
+M2_FISH_DATA.188	188	912345722	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2015-10-04T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Blenniid spp.	2	2	PBD	POINT (151.95 -23.25)
+M2_FISH_DATA.189	189	912345722	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2015-10-04T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Gobiid spp.	2	1	PBD	POINT (151.95 -23.25)
+M2_FISH_DATA.190	190	912345723	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2015-10-04T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Cirripectes spp.	1	1	ATC	POINT (151.95 -23.25)
+M2_FISH_DATA.191	191	912345723	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2015-10-04T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	2	ATC	POINT (151.95 -23.25)
+M2_FISH_DATA.192	192	912345723	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2015-10-04T13:00:00Z	8.5	Chordata	Actinopterygii	Apogonidae	Apogonid spp.	2	2	PBD	POINT (151.95 -23.25)
+M2_FISH_DATA.193	193	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Cirripectes filamentosus	1	1	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.194	194	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	2	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.195	195	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	2	4	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.196	196	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	4	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.197	197	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	3	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.198	198	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	1	2	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.199	199	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	2	3	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.200	200	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	1	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.201	201	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	1	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.202	202	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	2	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.203	203	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Plagiotremus tapeinosoma	2	1	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.204	204	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Pleurosicya spp.	1	5	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.205	205	912347125	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Synodontidae	Synodus variegatus	2	1	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.206	206	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	2	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.207	207	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	2	6	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.208	208	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	3	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.209	209	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	2	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.210	210	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	1	2	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.211	211	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	2	3	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.212	212	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	2	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.213	213	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	1	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.214	214	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	3	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.215	215	912347126	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS7	Broomfield Reef Site 2	-23.25	151.95	2017-03-08T13:00:00Z	8.5	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	4	CK	POINT (151.95 -23.25)
+M2_FISH_DATA.216	216	912345724	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	10	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.217	217	912345724	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	6	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.218	218	912345724	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	2	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.219	219	912345724	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8	Chordata	Actinopterygii	Serranidae	Epinephelus fasciatus	1	2	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.220	220	912345724	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8	Chordata	Actinopterygii	Holocentridae	Sargocentron rubrum	1	1	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.221	221	912345724	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Ctenogobiops pomastictus	2	3	PBD	POINT (151.94 -23.25)
+M2_FISH_DATA.222	222	912345725	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	12	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.223	223	912345725	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	3	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.224	224	912345725	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2015-10-05T13:00:00Z	8.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	1	ATC	POINT (151.94 -23.25)
+M2_FISH_DATA.225	225	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Plesiopidae	Assessor macneilli	1	10	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.226	226	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Apogonidae	Cheilodipterus quinquelineatus	1	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.227	227	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	2	2	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.228	228	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	3	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.229	229	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.230	230	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	1	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.231	231	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	2	4	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.232	232	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	3	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.233	233	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.234	234	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	6	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.235	235	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	6	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.236	236	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Gobiidae	Gobiodon quinquestrigatus	2	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.237	237	912347123	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8	Chordata	Actinopterygii	Scorpaenidae	Scorpaenid spp.	1	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.238	238	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Blenniella chrysospilos	1	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.239	239	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	10	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.240	240	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	2	6	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.241	241	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	5	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.242	242	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	3	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.243	243	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	1	17	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.244	244	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius sp. [black and green]	2	16	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.245	245	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Ecsenius spp.	1	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.246	246	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	2	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.247	247	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	4	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.248	248	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Blenniidae	Plagiotremus tapeinosoma	1	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.249	249	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Holocentridae	Sargocentron rubrum	1	1	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.250	250	912347124	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS8	Broomfield Reef Site 1	-23.25	151.94	2017-03-08T13:00:00Z	8.1	Chordata	Actinopterygii	Tripterygiidae	Ucla xenogrammus	1	2	CK	POINT (151.94 -23.25)
+M2_FISH_DATA.251	251	912345726	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS9	Broomfield Reef Site 3	-23.26	151.95	2015-10-05T13:00:00Z	9	Chordata	Actinopterygii	Blenniidae	Cirripectes spp.	1	1	ATC	POINT (151.95 -23.26)
+M2_FISH_DATA.252	252	912345726	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS9	Broomfield Reef Site 3	-23.26	151.95	2015-10-05T13:00:00Z	9	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	3	ATC	POINT (151.95 -23.26)
+M2_FISH_DATA.253	253	912349189	Spain	Alboran Sea	Temperate Northern Atlantic	AND64	Isla San Andrés (Parque Natural)	36.99	-1.89	2015-09-13T14:00:00Z	11.5	Chordata	Actinopterygii	Apogonidae	Apogon imberbis	1	1	NDL	POINT (-1.8900000000000001 36.99)
+M2_FISH_DATA.254	254	912349189	Spain	Alboran Sea	Temperate Northern Atlantic	AND64	Isla San Andrés (Parque Natural)	36.99	-1.89	2015-09-13T14:00:00Z	11.5	Chordata	Actinopterygii	Blenniidae	Parablennius gattorugine	1	1	NDL	POINT (-1.8900000000000001 36.99)
+M2_FISH_DATA.255	255	912349189	Spain	Alboran Sea	Temperate Northern Atlantic	AND64	Isla San Andrés (Parque Natural)	36.99	-1.89	2015-09-13T14:00:00Z	11.5	Chordata	Actinopterygii	Tripterygiidae	Tripterygion delaisi	1	3	NDL	POINT (-1.8900000000000001 36.99)
+M2_FISH_DATA.256	256	912349190	Spain	Alboran Sea	Temperate Northern Atlantic	AND65	Isla San Juan	37.35	-1.65	2015-09-13T14:00:00Z	9.6	Chordata	Actinopterygii	Apogonidae	Apogon imberbis	1	1	JASF	POINT (-1.65 37.35)
+M2_FISH_DATA.257	257	912349190	Spain	Alboran Sea	Temperate Northern Atlantic	AND65	Isla San Juan	37.35	-1.65	2015-09-13T14:00:00Z	9.6	Chordata	Actinopterygii	Scorpaenidae	Scorpaena notata	1	2	JASF	POINT (-1.65 37.35)
+M2_FISH_DATA.258	258	912349190	Spain	Alboran Sea	Temperate Northern Atlantic	AND65	Isla San Juan	37.35	-1.65	2015-09-13T14:00:00Z	9.6	Chordata	Actinopterygii	Tripterygiidae	Tripterygion tripteronotum	1	2	JASF	POINT (-1.65 37.35)
+M2_FISH_DATA.259	259	912349192	Spain	Alboran Sea	Temperate Northern Atlantic	AND66	Villaricos Norte	37.31	-1.7	2015-09-13T14:00:00Z	8.5	Chordata	Actinopterygii	Muraenidae	Muraena helena	2	1	NSM	POINT (-1.7 37.31)
+M2_FISH_DATA.260	260	912349192	Spain	Alboran Sea	Temperate Northern Atlantic	AND66	Villaricos Norte	37.31	-1.7	2015-09-13T14:00:00Z	8.5	Chordata	Actinopterygii	Scorpaenidae	Scorpaena porcus	2	1	NSM	POINT (-1.7 37.31)
+M2_FISH_DATA.261	261	912349133	Spain	Alboran Sea	Temperate Northern Atlantic	AND7	Adra	36.74	-3.01	2013-11-26T13:00:00Z	1.8	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	1	20	JASF	POINT (-3.01 36.74)
+M2_FISH_DATA.262	262	912349133	Spain	Alboran Sea	Temperate Northern Atlantic	AND7	Adra	36.74	-3.01	2013-11-26T13:00:00Z	1.8	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	2	6	JASF	POINT (-3.01 36.74)
+M2_FISH_DATA.263	263	912349133	Spain	Alboran Sea	Temperate Northern Atlantic	AND7	Adra	36.74	-3.01	2013-11-26T13:00:00Z	1.8	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	1	6	JASF	POINT (-3.01 36.74)
+M2_FISH_DATA.264	264	912349133	Spain	Alboran Sea	Temperate Northern Atlantic	AND7	Adra	36.74	-3.01	2013-11-26T13:00:00Z	1.8	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	2	1	JASF	POINT (-3.01 36.74)
+M2_FISH_DATA.265	265	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	1	2	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.266	266	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	2	3	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.267	267	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Gobiidae	Gobius geniporus	1	3	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.268	268	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Gobiidae	Gobius geniporus	2	3	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.269	269	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Gobiesocidae	Lepadogaster lepadogaster	2	2	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.270	270	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	1	5	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.271	271	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	2	5	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.272	272	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Scorpaenidae	Scorpaena porcus	1	1	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.273	273	912349134	Spain	Alboran Sea	Temperate Northern Atlantic	AND8	Almeria puerto	36.83	-2.46	2013-11-27T13:00:00Z	1.8	Chordata	Actinopterygii	Scorpaenidae	Scorpaena porcus	2	1	JASF	POINT (-2.46 36.83)
+M2_FISH_DATA.274	274	912344582	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2014-07-14T14:00:00Z	3	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	1	27	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.275	275	912344582	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2014-07-14T14:00:00Z	3	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	2	27	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.276	276	912344582	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2014-07-14T14:00:00Z	3	Chordata	Actinopterygii	Gobiesocidae	Lepadogaster candolii	1	1	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.277	277	912344582	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2014-07-14T14:00:00Z	3	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	1	6	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.278	278	912344582	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2014-07-14T14:00:00Z	3	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	2	14	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.279	279	912344582	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2014-07-14T14:00:00Z	3	Chordata	Actinopterygii	Scorpaenidae	Scorpaena porcus	1	1	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.280	280	912344582	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2014-07-14T14:00:00Z	3	Chordata	Actinopterygii	Tripterygiidae	Tripterygion delaisi	1	1	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.281	281	912349135	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2013-11-27T13:00:00Z	2.4	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	1	3	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.282	282	912349135	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2013-11-27T13:00:00Z	2.4	Chordata	Actinopterygii	Gobiidae	Gobius bucchichi	2	2	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.283	283	912349135	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2013-11-27T13:00:00Z	2.4	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	1	4	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.284	284	912349135	Spain	Alboran Sea	Temperate Northern Atlantic	AND9	Camping	36.82	-2.51	2013-11-27T13:00:00Z	2.4	Chordata	Actinopterygii	Blenniidae	Parablennius pilicornis	2	6	JASF	POINT (-2.51 36.82)
+M2_FISH_DATA.285	285	912345928	Antarctica	Antarctic Peninsula	Southern Ocean	ANT4	End Runway	-67.57	-68.13	2016-01-05T13:00:00Z	9	Chordata	Actinopterygii	Nototheniidae	Trematomus hansoni	1	1	SM	POINT (-68.13 -67.57)
+M2_FISH_DATA.286	286	912346517	Antarctica	Antarctic Peninsula	Southern Ocean	ANT5	Wharf	-67.57	-68.13	2016-01-06T13:00:00Z	9	Chordata	Actinopterygii	Nototheniidae	Notothenia coriiceps	2	1	SM	POINT (-68.13 -67.57)
+M2_FISH_DATA.287	287	912346517	Antarctica	Antarctic Peninsula	Southern Ocean	ANT5	Wharf	-67.57	-68.13	2016-01-06T13:00:00Z	9	Chordata	Actinopterygii	Nototheniidae	Trematomus newnesi	1	1	SM	POINT (-68.13 -67.57)
+M2_FISH_DATA.288	288	912346518	Antarctica	Antarctic Peninsula	Southern Ocean	ANT7	Trovall	-67.6	-68.21	2016-02-11T13:00:00Z	12	Chordata	Actinopterygii	Harpagiferidae	Harpagifer antarcticus	1	1	SM	POINT (-68.21 -67.6)
+M2_FISH_DATA.289	289	912346518	Antarctica	Antarctic Peninsula	Southern Ocean	ANT7	Trovall	-67.6	-68.21	2016-02-11T13:00:00Z	12	Chordata	Actinopterygii	Nototheniidae	Nototheniid spp.	2	1	SM	POINT (-68.21 -67.6)
diff -r 000000000000 -r 726a387cfdc2 test-data/Reel_life_survey_fish_modif2.tabular
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Reel_life_survey_fish_modif2.tabular	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,30 @@
+FID	Key	SurveyID	Country	Ecoregion	Realm	SiteCode	Site	SiteLat	SiteLong	SurveyDate	Depth	Phylum	Class	Family	Taxon	Block	Total	Diver	geom
+M2_FISH_DATA.1	1	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	2	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.2	2	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	5	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.3	3	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	8	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.4	4	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	6	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.5	5	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	9	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.6	6	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	1	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.7	7	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	2	19	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.8	8	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon histrio	1	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.9	9	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon histrio	2	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.10	10	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon sp. [3 GA]	1	12	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.11	11	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Gobiidae	Gobiodon spp.	2	5	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.12	12	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Scorpaenidae	Parascorpaena aurita	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.13	13	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Tripterygiidae	Ucla xenogrammus	1	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.14	14	912347736	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6	Chordata	Actinopterygii	Tripterygiidae	Ucla xenogrammus	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.15	15	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Plesiopidae	Assessor macneilli	2	20	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.16	16	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	1	4	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.17	17	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius bicolor	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.18	18	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	1	5	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.19	19	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius mandibularis	2	6	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.20	20	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	1	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.21	21	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Blenniidae	Ecsenius stictus	2	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.22	22	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Tripterygiidae	Enneapterygius similis	1	3	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.23	23	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Serranidae	Epinephelus fasciatus	2	1	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.24	24	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	1	6	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.25	25	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota guttata	2	8	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.26	26	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	1	7	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.27	27	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Eviota hoesei	2	12	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.28	28	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Gobiodon sp. [3 GA]	2	16	LVS	POINT (151.92 -23.18)
+M2_FISH_DATA.29	29	912347737	Australia	Central and Southern Great Barrier Reef	Central Indo-Pacific	AIMS12	North Island Site 3	-23.18	151.92	2017-02-13T13:00:00Z	6.1	Chordata	Actinopterygii	Gobiidae	Gobiodon spp.	2	7	LVS	POINT (151.92 -23.18)
diff -r 000000000000 -r 726a387cfdc2 test-data/SCBD.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/SCBD.txt	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,4 @@
+    Blenniidae       Gobiidae   Scorpaenidae Tripterygiidae    Plesiopidae 
+    0.13452280     0.12622864     0.05950360     0.15163110     0.07035376 
+    Apogonidae  Nototheniidae 
+    0.06153987     0.14519360 
diff -r 000000000000 -r 726a387cfdc2 test-data/data_frenchbbs.tabular
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/data_frenchbbs.tabular	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,851 @@
+"carre"	"annee"	"espece"	"abond"
+"440072"	2014	"ALAARV"	4
+"440072"	2014	"PARCAE"	5
+"440168"	2014	"ALAARV"	1
+"440168"	2014	"PARCAE"	10
+"440168"	2017	"ALAARV"	2
+"440168"	2017	"PARCAE"	12
+"440168"	2018	"ALAARV"	2
+"440168"	2018	"PARCAE"	20
+"440211"	2014	"ALAARV"	10
+"440211"	2014	"PARCAE"	5
+"440211"	2015	"ALAARV"	11
+"440211"	2015	"PARCAE"	6
+"440211"	2016	"ALAARV"	11
+"440211"	2016	"PARCAE"	2
+"440211"	2017	"ALAARV"	9
+"440211"	2017	"PARCAE"	2
+"440211"	2018	"ALAARV"	10
+"440211"	2018	"PARCAE"	8
+"440235"	2005	"ALAARV"	3
+"440235"	2005	"PARCAE"	15
+"440235"	2006	"ALAARV"	6
+"440235"	2006	"PARCAE"	12
+"440235"	2007	"ALAARV"	1
+"440235"	2007	"PARCAE"	10
+"440235"	2008	"ALAARV"	1
+"440235"	2008	"PARCAE"	12
+"440235"	2009	"ALAARV"	0
+"440235"	2009	"PARCAE"	13
+"440278"	2008	"ALAARV"	7
+"440278"	2008	"PARCAE"	7
+"440278"	2009	"ALAARV"	8
+"440278"	2009	"PARCAE"	14
+"440278"	2010	"ALAARV"	7
+"440278"	2010	"PARCAE"	5
+"440278"	2011	"ALAARV"	8
+"440278"	2011	"PARCAE"	7
+"440278"	2012	"ALAARV"	7
+"440278"	2012	"PARCAE"	8
+"440278"	2013	"ALAARV"	10
+"440278"	2013	"PARCAE"	8
+"440278"	2014	"ALAARV"	6
+"440278"	2014	"PARCAE"	7
+"440278"	2015	"ALAARV"	7
+"440278"	2015	"PARCAE"	7
+"440278"	2016	"ALAARV"	7
+"440278"	2016	"PARCAE"	7
+"440278"	2017	"ALAARV"	6
+"440278"	2017	"PARCAE"	2
+"440278"	2018	"ALAARV"	7
+"440278"	2018	"PARCAE"	7
+"440310"	2011	"ALAARV"	12
+"440310"	2011	"PARCAE"	5
+"440310"	2012	"ALAARV"	15
+"440310"	2012	"PARCAE"	13
+"440310"	2013	"ALAARV"	26
+"440310"	2013	"PARCAE"	12
+"440310"	2014	"ALAARV"	14
+"440310"	2014	"PARCAE"	8
+"440310"	2015	"ALAARV"	11
+"440310"	2015	"PARCAE"	8
+"440310"	2016	"ALAARV"	14
+"440310"	2016	"PARCAE"	10
+"440310"	2017	"ALAARV"	13
+"440310"	2017	"PARCAE"	12
+"440310"	2018	"ALAARV"	12
+"440310"	2018	"PARCAE"	11
+"440398"	2012	"ALAARV"	2
+"440398"	2012	"PARCAE"	2
+"440398"	2013	"ALAARV"	2
+"440398"	2013	"PARCAE"	2
+"440398"	2014	"ALAARV"	4
+"440398"	2014	"PARCAE"	6
+"440411"	2004	"ALAARV"	16
+"440411"	2004	"PARCAE"	5
+"440411"	2005	"ALAARV"	14
+"440411"	2005	"PARCAE"	8
+"440411"	2006	"ALAARV"	18
+"440411"	2006	"PARCAE"	10
+"440411"	2007	"ALAARV"	15
+"440411"	2007	"PARCAE"	7
+"440411"	2008	"ALAARV"	12
+"440411"	2008	"PARCAE"	9
+"440411"	2009	"ALAARV"	11
+"440411"	2009	"PARCAE"	5
+"440411"	2010	"ALAARV"	11
+"440411"	2010	"PARCAE"	2
+"440411"	2011	"ALAARV"	16
+"440411"	2011	"PARCAE"	5
+"440411"	2012	"ALAARV"	18
+"440411"	2012	"PARCAE"	2
+"440411"	2013	"ALAARV"	14
+"440411"	2013	"PARCAE"	11
+"440411"	2014	"ALAARV"	15
+"440411"	2014	"PARCAE"	9
+"440411"	2015	"ALAARV"	16
+"440411"	2015	"PARCAE"	3
+"440411"	2016	"ALAARV"	9
+"440411"	2016	"PARCAE"	3
+"440411"	2017	"ALAARV"	14
+"440411"	2017	"PARCAE"	13
+"440411"	2018	"ALAARV"	12
+"440411"	2018	"PARCAE"	6
+"440430"	2006	"ALAARV"	0
+"440430"	2006	"PARCAE"	5
+"440430"	2007	"ALAARV"	0
+"440430"	2007	"PARCAE"	4
+"440430"	2008	"ALAARV"	0
+"440430"	2008	"PARCAE"	7
+"440430"	2010	"ALAARV"	0
+"440430"	2010	"PARCAE"	3
+"440430"	2012	"ALAARV"	0
+"440430"	2012	"PARCAE"	2
+"440430"	2014	"ALAARV"	0
+"440430"	2014	"PARCAE"	3
+"440456"	2001	"ALAARV"	3
+"440456"	2001	"PARCAE"	10
+"440456"	2002	"ALAARV"	4
+"440456"	2002	"PARCAE"	11
+"440456"	2003	"ALAARV"	4
+"440456"	2003	"PARCAE"	14
+"440456"	2004	"ALAARV"	6
+"440456"	2004	"PARCAE"	16
+"440456"	2005	"ALAARV"	6
+"440456"	2005	"PARCAE"	13
+"440456"	2006	"ALAARV"	4
+"440456"	2006	"PARCAE"	9
+"440456"	2007	"ALAARV"	5
+"440456"	2007	"PARCAE"	11
+"440456"	2008	"ALAARV"	2
+"440456"	2008	"PARCAE"	8
+"440456"	2009	"ALAARV"	4
+"440456"	2009	"PARCAE"	10
+"440456"	2010	"ALAARV"	2
+"440456"	2010	"PARCAE"	15
+"440456"	2011	"ALAARV"	4
+"440456"	2011	"PARCAE"	14
+"440456"	2012	"ALAARV"	0
+"440456"	2012	"PARCAE"	11
+"440456"	2014	"ALAARV"	2
+"440456"	2014	"PARCAE"	12
+"440462"	2001	"ALAARV"	3
+"440462"	2001	"PARCAE"	3
+"440462"	2002	"ALAARV"	6
+"440462"	2002	"PARCAE"	5
+"440462"	2003	"ALAARV"	5
+"440462"	2003	"PARCAE"	8
+"440462"	2004	"ALAARV"	2
+"440462"	2004	"PARCAE"	6
+"440462"	2005	"ALAARV"	0
+"440462"	2005	"PARCAE"	13
+"440462"	2006	"ALAARV"	8
+"440462"	2006	"PARCAE"	11
+"440462"	2007	"ALAARV"	0
+"440462"	2007	"PARCAE"	13
+"440462"	2008	"ALAARV"	0
+"440462"	2008	"PARCAE"	12
+"440462"	2009	"ALAARV"	4
+"440462"	2009	"PARCAE"	11
+"440462"	2010	"ALAARV"	2
+"440462"	2010	"PARCAE"	18
+"440462"	2011	"ALAARV"	2
+"440462"	2011	"PARCAE"	7
+"440462"	2012	"ALAARV"	0
+"440462"	2012	"PARCAE"	14
+"440462"	2013	"ALAARV"	3
+"440462"	2013	"PARCAE"	9
+"440462"	2014	"ALAARV"	0
+"440462"	2014	"PARCAE"	11
+"440480"	2001	"ALAARV"	14
+"440480"	2001	"PARCAE"	3
+"440480"	2002	"ALAARV"	6
+"440480"	2002	"PARCAE"	7
+"440480"	2003	"ALAARV"	5
+"440480"	2003	"PARCAE"	4
+"440480"	2004	"ALAARV"	5
+"440480"	2004	"PARCAE"	3
+"440480"	2005	"ALAARV"	7
+"440480"	2005	"PARCAE"	8
+"440480"	2006	"ALAARV"	6
+"440480"	2006	"PARCAE"	1
+"440480"	2007	"ALAARV"	7
+"440480"	2007	"PARCAE"	2
+"440480"	2008	"ALAARV"	3
+"440480"	2008	"PARCAE"	8
+"440480"	2009	"ALAARV"	3
+"440480"	2009	"PARCAE"	2
+"440480"	2010	"ALAARV"	6
+"440480"	2010	"PARCAE"	8
+"440480"	2011	"ALAARV"	5
+"440480"	2011	"PARCAE"	1
+"440480"	2012	"ALAARV"	7
+"440480"	2012	"PARCAE"	10
+"440480"	2013	"ALAARV"	1
+"440480"	2013	"PARCAE"	5
+"440480"	2014	"ALAARV"	4
+"440480"	2014	"PARCAE"	5
+"440480"	2015	"ALAARV"	0
+"440480"	2015	"PARCAE"	11
+"440480"	2016	"ALAARV"	4
+"440480"	2016	"PARCAE"	5
+"440480"	2017	"ALAARV"	3
+"440480"	2017	"PARCAE"	6
+"440637"	2015	"ALAARV"	1
+"440637"	2015	"PARCAE"	15
+"440637"	2016	"ALAARV"	2
+"440637"	2016	"PARCAE"	15
+"440637"	2017	"ALAARV"	1
+"440637"	2017	"PARCAE"	7
+"440637"	2018	"ALAARV"	2
+"440637"	2018	"PARCAE"	6
+"440660"	2001	"ALAARV"	7
+"440660"	2001	"PARCAE"	10
+"440660"	2002	"ALAARV"	9
+"440660"	2002	"PARCAE"	8
+"440660"	2003	"ALAARV"	10
+"440660"	2003	"PARCAE"	5
+"440660"	2004	"ALAARV"	6
+"440660"	2004	"PARCAE"	3
+"440660"	2005	"ALAARV"	9
+"440660"	2005	"PARCAE"	11
+"440660"	2006	"ALAARV"	8
+"440660"	2006	"PARCAE"	9
+"440660"	2007	"ALAARV"	6
+"440660"	2007	"PARCAE"	4
+"440660"	2008	"ALAARV"	9
+"440660"	2008	"PARCAE"	15
+"440660"	2009	"ALAARV"	5
+"440660"	2009	"PARCAE"	3
+"440660"	2010	"ALAARV"	10
+"440660"	2010	"PARCAE"	4
+"440660"	2011	"ALAARV"	11
+"440660"	2011	"PARCAE"	4
+"440660"	2012	"ALAARV"	10
+"440660"	2012	"PARCAE"	2
+"440660"	2013	"ALAARV"	9
+"440660"	2013	"PARCAE"	7
+"440660"	2014	"ALAARV"	6
+"440660"	2014	"PARCAE"	10
+"440665"	2016	"ALAARV"	0
+"440665"	2016	"PARCAE"	14
+"440665"	2017	"ALAARV"	0
+"440665"	2017	"PARCAE"	12
+"440665"	2018	"ALAARV"	0
+"440665"	2018	"PARCAE"	7
+"440817"	2001	"ALAARV"	1
+"440817"	2001	"PARCAE"	10
+"440817"	2002	"ALAARV"	2
+"440817"	2002	"PARCAE"	15
+"440817"	2003	"ALAARV"	1
+"440817"	2003	"PARCAE"	14
+"440817"	2004	"ALAARV"	2
+"440817"	2004	"PARCAE"	24
+"440817"	2005	"ALAARV"	0
+"440817"	2005	"PARCAE"	12
+"440817"	2006	"ALAARV"	0
+"440817"	2006	"PARCAE"	6
+"440817"	2007	"ALAARV"	1
+"440817"	2007	"PARCAE"	5
+"440817"	2008	"ALAARV"	0
+"440817"	2008	"PARCAE"	11
+"440817"	2009	"ALAARV"	1
+"440817"	2009	"PARCAE"	13
+"440817"	2010	"ALAARV"	0
+"440817"	2010	"PARCAE"	8
+"440817"	2011	"ALAARV"	0
+"440817"	2011	"PARCAE"	6
+"440817"	2012	"ALAARV"	0
+"440817"	2012	"PARCAE"	4
+"440817"	2013	"ALAARV"	0
+"440817"	2013	"PARCAE"	4
+"440841"	2016	"ALAARV"	2
+"440841"	2016	"PARCAE"	13
+"440841"	2017	"ALAARV"	8
+"440841"	2017	"PARCAE"	20
+"440877"	2006	"ALAARV"	1
+"440877"	2006	"PARCAE"	4
+"440877"	2007	"ALAARV"	0
+"440877"	2007	"PARCAE"	8
+"440877"	2008	"ALAARV"	1
+"440877"	2008	"PARCAE"	8
+"440877"	2009	"ALAARV"	0
+"440877"	2009	"PARCAE"	6
+"440877"	2010	"ALAARV"	0
+"440877"	2010	"PARCAE"	3
+"440877"	2011	"ALAARV"	0
+"440877"	2011	"PARCAE"	3
+"440877"	2012	"ALAARV"	1
+"440877"	2012	"PARCAE"	8
+"440877"	2013	"ALAARV"	0
+"440877"	2013	"PARCAE"	1
+"440877"	2014	"ALAARV"	0
+"440877"	2014	"PARCAE"	3
+"440877"	2015	"ALAARV"	0
+"440877"	2015	"PARCAE"	4
+"440877"	2016	"ALAARV"	0
+"440877"	2016	"PARCAE"	4
+"440877"	2017	"ALAARV"	1
+"440877"	2017	"PARCAE"	5
+"440877"	2018	"ALAARV"	0
+"440877"	2018	"PARCAE"	10
+"440891"	2002	"ALAARV"	12
+"440891"	2002	"PARCAE"	1
+"440891"	2003	"ALAARV"	21
+"440891"	2003	"PARCAE"	2
+"440891"	2004	"ALAARV"	14
+"440891"	2004	"PARCAE"	5
+"440891"	2005	"ALAARV"	16
+"440891"	2005	"PARCAE"	4
+"440891"	2006	"ALAARV"	7
+"440891"	2006	"PARCAE"	1
+"440891"	2008	"ALAARV"	10
+"440891"	2008	"PARCAE"	4
+"440891"	2009	"ALAARV"	10
+"440891"	2009	"PARCAE"	4
+"440891"	2011	"ALAARV"	8
+"440891"	2011	"PARCAE"	11
+"440891"	2013	"ALAARV"	5
+"440891"	2013	"PARCAE"	5
+"440891"	2014	"ALAARV"	7
+"440891"	2014	"PARCAE"	8
+"440891"	2015	"ALAARV"	6
+"440891"	2015	"PARCAE"	2
+"440891"	2016	"ALAARV"	7
+"440891"	2016	"PARCAE"	4
+"440891"	2017	"ALAARV"	4
+"440891"	2017	"PARCAE"	3
+"440891"	2018	"ALAARV"	4
+"440891"	2018	"PARCAE"	5
+"440932"	2015	"ALAARV"	3
+"440932"	2015	"PARCAE"	11
+"440932"	2016	"ALAARV"	3
+"440932"	2016	"PARCAE"	14
+"440932"	2017	"ALAARV"	1
+"440932"	2017	"PARCAE"	16
+"440932"	2018	"ALAARV"	2
+"440932"	2018	"PARCAE"	15
+"440989"	2018	"ALAARV"	0
+"440989"	2018	"PARCAE"	8
+"440990"	2010	"ALAARV"	1
+"440990"	2010	"PARCAE"	1
+"440990"	2011	"ALAARV"	2
+"440990"	2011	"PARCAE"	15
+"440990"	2012	"ALAARV"	5
+"440990"	2012	"PARCAE"	7
+"440990"	2013	"ALAARV"	2
+"440990"	2013	"PARCAE"	10
+"440990"	2014	"ALAARV"	1
+"440990"	2014	"PARCAE"	26
+"440990"	2015	"ALAARV"	7
+"440990"	2015	"PARCAE"	12
+"440990"	2016	"ALAARV"	2
+"440990"	2016	"PARCAE"	9
+"440990"	2017	"ALAARV"	4
+"440990"	2017	"PARCAE"	7
+"440990"	2018	"ALAARV"	5
+"440990"	2018	"PARCAE"	7
+"440993"	2001	"ALAARV"	0
+"440993"	2001	"PARCAE"	6
+"440993"	2002	"ALAARV"	1
+"440993"	2002	"PARCAE"	5
+"440993"	2003	"ALAARV"	1
+"440993"	2003	"PARCAE"	7
+"440993"	2004	"ALAARV"	0
+"440993"	2004	"PARCAE"	7
+"440993"	2005	"ALAARV"	2
+"440993"	2005	"PARCAE"	10
+"440993"	2006	"ALAARV"	0
+"440993"	2006	"PARCAE"	10
+"440993"	2007	"ALAARV"	2
+"440993"	2007	"PARCAE"	8
+"440993"	2008	"ALAARV"	0
+"440993"	2008	"PARCAE"	8
+"440993"	2009	"ALAARV"	0
+"440993"	2009	"PARCAE"	8
+"440993"	2010	"ALAARV"	0
+"440993"	2010	"PARCAE"	16
+"440993"	2011	"ALAARV"	1
+"440993"	2011	"PARCAE"	6
+"440993"	2012	"ALAARV"	0
+"440993"	2012	"PARCAE"	2
+"441008"	2002	"ALAARV"	12
+"441008"	2002	"PARCAE"	0
+"441008"	2003	"ALAARV"	14
+"441008"	2003	"PARCAE"	0
+"441008"	2004	"ALAARV"	11
+"441008"	2004	"PARCAE"	0
+"441008"	2005	"ALAARV"	12
+"441008"	2005	"PARCAE"	0
+"441008"	2014	"ALAARV"	7
+"441008"	2014	"PARCAE"	0
+"441008"	2015	"ALAARV"	8
+"441008"	2015	"PARCAE"	0
+"441008"	2016	"ALAARV"	3
+"441008"	2016	"PARCAE"	0
+"441008"	2017	"ALAARV"	7
+"441008"	2017	"PARCAE"	0
+"441008"	2018	"ALAARV"	9
+"441008"	2018	"PARCAE"	0
+"441032"	2016	"ALAARV"	0
+"441032"	2016	"PARCAE"	7
+"441032"	2017	"ALAARV"	0
+"441032"	2017	"PARCAE"	8
+"441048"	2002	"ALAARV"	0
+"441048"	2002	"PARCAE"	19
+"441048"	2003	"ALAARV"	0
+"441048"	2003	"PARCAE"	0
+"441051"	2016	"ALAARV"	0
+"441051"	2016	"PARCAE"	3
+"441051"	2017	"ALAARV"	2
+"441051"	2017	"PARCAE"	3
+"441053"	2001	"ALAARV"	0
+"441053"	2001	"PARCAE"	2
+"441053"	2002	"ALAARV"	0
+"441053"	2002	"PARCAE"	4
+"441053"	2003	"ALAARV"	0
+"441053"	2003	"PARCAE"	4
+"441053"	2004	"ALAARV"	0
+"441053"	2004	"PARCAE"	1
+"441053"	2005	"ALAARV"	1
+"441053"	2005	"PARCAE"	5
+"441053"	2006	"ALAARV"	0
+"441053"	2006	"PARCAE"	4
+"441053"	2007	"ALAARV"	0
+"441053"	2007	"PARCAE"	5
+"441053"	2008	"ALAARV"	0
+"441053"	2008	"PARCAE"	5
+"441053"	2009	"ALAARV"	0
+"441053"	2009	"PARCAE"	0
+"441053"	2010	"ALAARV"	0
+"441053"	2010	"PARCAE"	3
+"441053"	2011	"ALAARV"	2
+"441053"	2011	"PARCAE"	3
+"441053"	2012	"ALAARV"	0
+"441053"	2012	"PARCAE"	4
+"441053"	2013	"ALAARV"	0
+"441053"	2013	"PARCAE"	0
+"441053"	2014	"ALAARV"	0
+"441053"	2014	"PARCAE"	2
+"441053"	2015	"ALAARV"	0
+"441053"	2015	"PARCAE"	3
+"441053"	2016	"ALAARV"	0
+"441053"	2016	"PARCAE"	2
+"441053"	2017	"ALAARV"	0
+"441053"	2017	"PARCAE"	2
+"441053"	2018	"ALAARV"	0
+"441053"	2018	"PARCAE"	2
+"441061"	2001	"ALAARV"	2
+"441061"	2001	"PARCAE"	1
+"441061"	2002	"ALAARV"	0
+"441061"	2002	"PARCAE"	2
+"441061"	2003	"ALAARV"	0
+"441061"	2003	"PARCAE"	5
+"441061"	2004	"ALAARV"	0
+"441061"	2004	"PARCAE"	1
+"441061"	2005	"ALAARV"	0
+"441061"	2005	"PARCAE"	1
+"441061"	2006	"ALAARV"	0
+"441061"	2006	"PARCAE"	4
+"441061"	2007	"ALAARV"	0
+"441061"	2007	"PARCAE"	7
+"441061"	2008	"ALAARV"	0
+"441061"	2008	"PARCAE"	7
+"441061"	2009	"ALAARV"	0
+"441061"	2009	"PARCAE"	2
+"441061"	2010	"ALAARV"	0
+"441061"	2010	"PARCAE"	3
+"441061"	2011	"ALAARV"	0
+"441061"	2011	"PARCAE"	9
+"441061"	2012	"ALAARV"	0
+"441061"	2012	"PARCAE"	3
+"441077"	2004	"ALAARV"	2
+"441077"	2004	"PARCAE"	16
+"441077"	2005	"ALAARV"	2
+"441077"	2005	"PARCAE"	15
+"441077"	2006	"ALAARV"	1
+"441077"	2006	"PARCAE"	19
+"441077"	2007	"ALAARV"	1
+"441077"	2007	"PARCAE"	6
+"441077"	2008	"ALAARV"	3
+"441077"	2008	"PARCAE"	16
+"441077"	2009	"ALAARV"	1
+"441077"	2009	"PARCAE"	9
+"441077"	2010	"ALAARV"	1
+"441077"	2010	"PARCAE"	19
+"441077"	2011	"ALAARV"	0
+"441077"	2011	"PARCAE"	16
+"441077"	2012	"ALAARV"	0
+"441077"	2012	"PARCAE"	10
+"441077"	2013	"ALAARV"	0
+"441077"	2013	"PARCAE"	16
+"441077"	2015	"ALAARV"	0
+"441077"	2015	"PARCAE"	8
+"441077"	2016	"ALAARV"	1
+"441077"	2016	"PARCAE"	17
+"441077"	2017	"ALAARV"	0
+"441077"	2017	"PARCAE"	6
+"441077"	2018	"ALAARV"	0
+"441077"	2018	"PARCAE"	7
+"441082"	2001	"ALAARV"	2
+"441082"	2001	"PARCAE"	7
+"441082"	2002	"ALAARV"	5
+"441082"	2002	"PARCAE"	6
+"441082"	2003	"ALAARV"	0
+"441082"	2003	"PARCAE"	6
+"441082"	2004	"ALAARV"	1
+"441082"	2004	"PARCAE"	5
+"441082"	2005	"ALAARV"	2
+"441082"	2005	"PARCAE"	15
+"441082"	2006	"ALAARV"	0
+"441082"	2006	"PARCAE"	16
+"441082"	2007	"ALAARV"	1
+"441082"	2007	"PARCAE"	13
+"441082"	2008	"ALAARV"	0
+"441082"	2008	"PARCAE"	13
+"441082"	2009	"ALAARV"	0
+"441082"	2009	"PARCAE"	12
+"441082"	2010	"ALAARV"	0
+"441082"	2010	"PARCAE"	15
+"441082"	2012	"ALAARV"	0
+"441082"	2012	"PARCAE"	10
+"441082"	2013	"ALAARV"	0
+"441082"	2013	"PARCAE"	5
+"441082"	2014	"ALAARV"	0
+"441082"	2014	"PARCAE"	10
+"441082"	2015	"ALAARV"	0
+"441082"	2015	"PARCAE"	1
+"441109"	2002	"ALAARV"	0
+"441109"	2002	"PARCAE"	11
+"441109"	2003	"ALAARV"	0
+"441109"	2003	"PARCAE"	12
+"441109"	2004	"ALAARV"	0
+"441109"	2004	"PARCAE"	9
+"441109"	2005	"ALAARV"	1
+"441109"	2005	"PARCAE"	12
+"441109"	2006	"ALAARV"	0
+"441109"	2006	"PARCAE"	20
+"441109"	2007	"ALAARV"	0
+"441109"	2007	"PARCAE"	12
+"441109"	2008	"ALAARV"	0
+"441109"	2008	"PARCAE"	12
+"441109"	2009	"ALAARV"	0
+"441109"	2009	"PARCAE"	10
+"441109"	2010	"ALAARV"	0
+"441109"	2010	"PARCAE"	11
+"441109"	2011	"ALAARV"	0
+"441109"	2011	"PARCAE"	8
+"441109"	2012	"ALAARV"	0
+"441109"	2012	"PARCAE"	7
+"441109"	2013	"ALAARV"	0
+"441109"	2013	"PARCAE"	13
+"441109"	2014	"ALAARV"	0
+"441109"	2014	"PARCAE"	10
+"441109"	2016	"ALAARV"	1
+"441109"	2016	"PARCAE"	17
+"441109"	2017	"ALAARV"	0
+"441109"	2017	"PARCAE"	18
+"441109"	2018	"ALAARV"	0
+"441109"	2018	"PARCAE"	18
+"441132"	2002	"ALAARV"	3
+"441132"	2002	"PARCAE"	3
+"441132"	2003	"ALAARV"	3
+"441132"	2003	"PARCAE"	1
+"441132"	2004	"ALAARV"	3
+"441132"	2004	"PARCAE"	4
+"441132"	2005	"ALAARV"	6
+"441132"	2005	"PARCAE"	1
+"441132"	2006	"ALAARV"	6
+"441132"	2006	"PARCAE"	3
+"441132"	2007	"ALAARV"	3
+"441132"	2007	"PARCAE"	2
+"441132"	2008	"ALAARV"	1
+"441132"	2008	"PARCAE"	2
+"441132"	2009	"ALAARV"	1
+"441132"	2009	"PARCAE"	2
+"441132"	2010	"ALAARV"	0
+"441132"	2010	"PARCAE"	5
+"441132"	2011	"ALAARV"	2
+"441132"	2011	"PARCAE"	3
+"441132"	2012	"ALAARV"	0
+"441132"	2012	"PARCAE"	11
+"441132"	2013	"ALAARV"	0
+"441132"	2013	"PARCAE"	3
+"441132"	2014	"ALAARV"	0
+"441132"	2014	"PARCAE"	1
+"441132"	2016	"ALAARV"	2
+"441132"	2016	"PARCAE"	6
+"441132"	2017	"ALAARV"	2
+"441132"	2017	"PARCAE"	20
+"441132"	2018	"ALAARV"	0
+"441132"	2018	"PARCAE"	1
+"441153"	2009	"ALAARV"	0
+"441153"	2009	"PARCAE"	14
+"441153"	2010	"ALAARV"	0
+"441153"	2010	"PARCAE"	38
+"441153"	2011	"ALAARV"	0
+"441153"	2011	"PARCAE"	11
+"441153"	2012	"ALAARV"	0
+"441153"	2012	"PARCAE"	21
+"441178"	2001	"ALAARV"	4
+"441178"	2001	"PARCAE"	4
+"441178"	2002	"ALAARV"	0
+"441178"	2002	"PARCAE"	11
+"441178"	2003	"ALAARV"	5
+"441178"	2003	"PARCAE"	12
+"441178"	2004	"ALAARV"	0
+"441178"	2004	"PARCAE"	8
+"441178"	2005	"ALAARV"	1
+"441178"	2005	"PARCAE"	20
+"441178"	2006	"ALAARV"	0
+"441178"	2006	"PARCAE"	23
+"441178"	2007	"ALAARV"	2
+"441178"	2007	"PARCAE"	18
+"441178"	2008	"ALAARV"	1
+"441178"	2008	"PARCAE"	14
+"441178"	2009	"ALAARV"	0
+"441178"	2009	"PARCAE"	10
+"441178"	2010	"ALAARV"	1
+"441178"	2010	"PARCAE"	15
+"441178"	2011	"ALAARV"	0
+"441178"	2011	"PARCAE"	9
+"441178"	2012	"ALAARV"	2
+"441178"	2012	"PARCAE"	8
+"441178"	2013	"ALAARV"	0
+"441178"	2013	"PARCAE"	15
+"441178"	2014	"ALAARV"	0
+"441178"	2014	"PARCAE"	10
+"441178"	2015	"ALAARV"	1
+"441178"	2015	"PARCAE"	10
+"441178"	2016	"ALAARV"	0
+"441178"	2016	"PARCAE"	4
+"441178"	2017	"ALAARV"	0
+"441178"	2017	"PARCAE"	13
+"441178"	2018	"ALAARV"	1
+"441178"	2018	"PARCAE"	22
+"441217"	2003	"ALAARV"	4
+"441217"	2003	"PARCAE"	13
+"441217"	2004	"ALAARV"	5
+"441217"	2004	"PARCAE"	4
+"441217"	2005	"ALAARV"	2
+"441217"	2005	"PARCAE"	6
+"441217"	2006	"ALAARV"	3
+"441217"	2006	"PARCAE"	3
+"441217"	2007	"ALAARV"	3
+"441217"	2007	"PARCAE"	5
+"441217"	2008	"ALAARV"	5
+"441217"	2008	"PARCAE"	5
+"441217"	2011	"ALAARV"	6
+"441217"	2011	"PARCAE"	2
+"441217"	2014	"ALAARV"	2
+"441217"	2014	"PARCAE"	6
+"441217"	2016	"ALAARV"	5
+"441217"	2016	"PARCAE"	4
+"441217"	2018	"ALAARV"	4
+"441217"	2018	"PARCAE"	8
+"441233"	2001	"ALAARV"	2
+"441233"	2001	"PARCAE"	3
+"441233"	2002	"ALAARV"	1
+"441233"	2002	"PARCAE"	7
+"441233"	2003	"ALAARV"	1
+"441233"	2003	"PARCAE"	5
+"441233"	2004	"ALAARV"	0
+"441233"	2004	"PARCAE"	2
+"441233"	2005	"ALAARV"	1
+"441233"	2005	"PARCAE"	3
+"441233"	2006	"ALAARV"	0
+"441233"	2006	"PARCAE"	2
+"441233"	2007	"ALAARV"	0
+"441233"	2007	"PARCAE"	1
+"441233"	2008	"ALAARV"	1
+"441233"	2008	"PARCAE"	2
+"441233"	2009	"ALAARV"	0
+"441233"	2009	"PARCAE"	7
+"441236"	2004	"ALAARV"	0
+"441236"	2004	"PARCAE"	7
+"441236"	2005	"ALAARV"	0
+"441236"	2005	"PARCAE"	10
+"441236"	2006	"ALAARV"	0
+"441236"	2006	"PARCAE"	4
+"441236"	2007	"ALAARV"	0
+"441236"	2007	"PARCAE"	6
+"441236"	2008	"ALAARV"	0
+"441236"	2008	"PARCAE"	9
+"441236"	2009	"ALAARV"	0
+"441236"	2009	"PARCAE"	14
+"441236"	2010	"ALAARV"	0
+"441236"	2010	"PARCAE"	4
+"441236"	2011	"ALAARV"	0
+"441236"	2011	"PARCAE"	16
+"441236"	2012	"ALAARV"	0
+"441236"	2012	"PARCAE"	10
+"441236"	2013	"ALAARV"	0
+"441236"	2013	"PARCAE"	8
+"441242"	2002	"ALAARV"	0
+"441242"	2002	"PARCAE"	3
+"441242"	2003	"ALAARV"	0
+"441242"	2003	"PARCAE"	5
+"441242"	2004	"ALAARV"	0
+"441242"	2004	"PARCAE"	1
+"441242"	2005	"ALAARV"	0
+"441242"	2005	"PARCAE"	3
+"441242"	2006	"ALAARV"	0
+"441242"	2006	"PARCAE"	6
+"441242"	2007	"ALAARV"	0
+"441242"	2007	"PARCAE"	6
+"441242"	2008	"ALAARV"	0
+"441242"	2008	"PARCAE"	8
+"441242"	2009	"ALAARV"	0
+"441242"	2009	"PARCAE"	7
+"441242"	2010	"ALAARV"	0
+"441242"	2010	"PARCAE"	3
+"441242"	2011	"ALAARV"	0
+"441242"	2011	"PARCAE"	6
+"441242"	2012	"ALAARV"	0
+"441242"	2012	"PARCAE"	9
+"441242"	2013	"ALAARV"	0
+"441242"	2013	"PARCAE"	9
+"441242"	2014	"ALAARV"	0
+"441242"	2014	"PARCAE"	10
+"441242"	2015	"ALAARV"	0
+"441242"	2015	"PARCAE"	9
+"441242"	2016	"ALAARV"	0
+"441242"	2016	"PARCAE"	5
+"441242"	2017	"ALAARV"	0
+"441242"	2017	"PARCAE"	5
+"441242"	2018	"ALAARV"	0
+"441242"	2018	"PARCAE"	4
+"441259"	2018	"ALAARV"	2
+"441259"	2018	"PARCAE"	14
+"441265"	2004	"ALAARV"	2
+"441265"	2004	"PARCAE"	6
+"441265"	2005	"ALAARV"	2
+"441265"	2005	"PARCAE"	3
+"441265"	2006	"ALAARV"	2
+"441265"	2006	"PARCAE"	0
+"441265"	2007	"ALAARV"	0
+"441265"	2007	"PARCAE"	4
+"441265"	2008	"ALAARV"	1
+"441265"	2008	"PARCAE"	7
+"441265"	2009	"ALAARV"	1
+"441265"	2009	"PARCAE"	4
+"441265"	2010	"ALAARV"	1
+"441265"	2010	"PARCAE"	2
+"441265"	2011	"ALAARV"	2
+"441265"	2011	"PARCAE"	13
+"441265"	2012	"ALAARV"	0
+"441265"	2012	"PARCAE"	5
+"441265"	2013	"ALAARV"	1
+"441265"	2013	"PARCAE"	4
+"441307"	2016	"ALAARV"	2
+"441307"	2016	"PARCAE"	10
+"441307"	2017	"ALAARV"	2
+"441307"	2017	"PARCAE"	3
+"441307"	2018	"ALAARV"	1
+"441307"	2018	"PARCAE"	6
+"441311"	2015	"ALAARV"	0
+"441311"	2015	"PARCAE"	12
+"441311"	2016	"ALAARV"	0
+"441311"	2016	"PARCAE"	6
+"441311"	2017	"ALAARV"	0
+"441311"	2017	"PARCAE"	6
+"441311"	2018	"ALAARV"	0
+"441311"	2018	"PARCAE"	15
+"441340"	2004	"ALAARV"	0
+"441340"	2004	"PARCAE"	10
+"441340"	2005	"ALAARV"	0
+"441340"	2005	"PARCAE"	10
+"441340"	2006	"ALAARV"	0
+"441340"	2006	"PARCAE"	8
+"441340"	2007	"ALAARV"	0
+"441340"	2007	"PARCAE"	7
+"441340"	2008	"ALAARV"	0
+"441340"	2008	"PARCAE"	6
+"441340"	2009	"ALAARV"	0
+"441340"	2009	"PARCAE"	7
+"441340"	2010	"ALAARV"	0
+"441340"	2010	"PARCAE"	2
+"441340"	2011	"ALAARV"	0
+"441340"	2011	"PARCAE"	6
+"441340"	2012	"ALAARV"	0
+"441340"	2012	"PARCAE"	6
+"441340"	2013	"ALAARV"	0
+"441340"	2013	"PARCAE"	7
+"441340"	2014	"ALAARV"	0
+"441340"	2014	"PARCAE"	6
+"441340"	2015	"ALAARV"	0
+"441340"	2015	"PARCAE"	5
+"441376"	2014	"ALAARV"	0
+"441376"	2014	"PARCAE"	15
+"441376"	2015	"ALAARV"	0
+"441376"	2015	"PARCAE"	10
+"441376"	2016	"ALAARV"	0
+"441376"	2016	"PARCAE"	7
+"441376"	2017	"ALAARV"	0
+"441376"	2017	"PARCAE"	13
+"441376"	2018	"ALAARV"	0
+"441376"	2018	"PARCAE"	18
+"441558"	2001	"ALAARV"	2
+"441558"	2001	"PARCAE"	6
+"441558"	2002	"ALAARV"	1
+"441558"	2002	"PARCAE"	0
+"441558"	2003	"ALAARV"	1
+"441558"	2003	"PARCAE"	0
+"441558"	2004	"ALAARV"	2
+"441558"	2004	"PARCAE"	3
+"441558"	2005	"ALAARV"	1
+"441558"	2005	"PARCAE"	1
+"441558"	2006	"ALAARV"	1
+"441558"	2006	"PARCAE"	3
+"441558"	2007	"ALAARV"	2
+"441558"	2007	"PARCAE"	4
+"441558"	2008	"ALAARV"	1
+"441558"	2008	"PARCAE"	4
+"441558"	2009	"ALAARV"	1
+"441558"	2009	"PARCAE"	5
+"441558"	2011	"ALAARV"	1
+"441558"	2011	"PARCAE"	0
+"441558"	2012	"ALAARV"	0
+"441558"	2012	"PARCAE"	1
+"441594"	2004	"ALAARV"	12
+"441594"	2004	"PARCAE"	3
+"441594"	2005	"ALAARV"	9
+"441594"	2005	"PARCAE"	3
+"441594"	2006	"ALAARV"	10
+"441594"	2006	"PARCAE"	1
+"441594"	2007	"ALAARV"	5
+"441594"	2007	"PARCAE"	3
+"441594"	2008	"ALAARV"	6
+"441594"	2008	"PARCAE"	6
+"441594"	2009	"ALAARV"	1
+"441594"	2009	"PARCAE"	5
+"441640"	2012	"ALAARV"	12
+"441640"	2012	"PARCAE"	4
+"441680"	2012	"ALAARV"	2
+"441680"	2012	"PARCAE"	4
+"441680"	2013	"ALAARV"	1
+"441680"	2013	"PARCAE"	7
+"441680"	2014	"ALAARV"	0
+"441680"	2014	"PARCAE"	7
+"441680"	2015	"ALAARV"	1
+"441680"	2015	"PARCAE"	5
+"441680"	2016	"ALAARV"	0
+"441680"	2016	"PARCAE"	2
+"441680"	2017	"ALAARV"	0
+"441680"	2017	"PARCAE"	5
+"441680"	2018	"ALAARV"	0
+"441680"	2018	"PARCAE"	7
+"Ile de"	2018	"ALAARV"	3
+"Ile de"	2018	"PARCAE"	7
+"Le Mas"	2018	"ALAARV"	0
+"Le Mas"	2018	"PARCAE"	7
\ No newline at end of file
diff -r 000000000000 -r 726a387cfdc2 test-data/levene.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/levene.txt	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,8 @@
+
+write table with levene test. 
+--> "Levene's Test for Homogeneity of Variance (center = median)"
+       Df F value    Pr(>F)    "
+group   1   22.02 3.145e-06 ***"
+      848                      "
+---"
+Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1"
diff -r 000000000000 -r 726a387cfdc2 test-data/species.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/species.txt	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,6 @@
+Blenniidae
+Gobiidae
+Scorpaenidae
+Tripterygiidae
+Plesiopidae
+Serranidae
diff -r 000000000000 -r 726a387cfdc2 test-data/test_bbs2.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_bbs2.txt	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,8 @@
+
+write table with levene test. 
+--> "Levene's Test for Homogeneity of Variance (center = median)"
+       Df F value    Pr(>F)    "
+group   1   22.02 3.145e-06 ***"
+      848                      "
+---"
+Signif. codes:  0 ‘***’ 0.001 ‘**’ 0.01 ‘*’ 0.05 ‘.’ 0.1 ‘ ’ 1"
diff -r 000000000000 -r 726a387cfdc2 test-data/test_fish2.tabular
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_fish2.tabular	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,2 @@
+"x"
+"1" 6
diff -r 000000000000 -r 726a387cfdc2 test-data/test_value_fish2.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_value_fish2.txt	Fri Aug 13 18:17:11 2021 +0000
@@ -0,0 +1,10 @@
+
+write table with eigenvalue. 
+--> "        eigenvalue variance.percent cumulative.variance.percent"
+Dim.1 2.849961e+00     5.699922e+01                    56.99922"
+Dim.2 1.229238e+00     2.458475e+01                    81.58397"
+Dim.3 7.482796e-01     1.496559e+01                    96.54956"
+Dim.4 1.725220e-01     3.450440e+00                   100.00000"
+Dim.5 1.948918e-14     3.897836e-13                   100.00000"
+Dim.6 9.545002e-34     1.909000e-32                   100.00000"
+Dim.7 2.137718e-35     4.275436e-34                   100.00000"