Mercurial > repos > ecology > vigiechiro_bilanenrichirp
comparison BilanEnrichiRP.R @ 2:5ad79c210eb9 draft default tip
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/vigiechiro commit 4707473e9991d095310f475a54e041c95accd873
| author | ecology |
|---|---|
| date | Wed, 05 Jun 2019 13:48:23 -0400 |
| parents | be4e28da3919 |
| children |
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| 1:be4e28da3919 | 2:5ad79c210eb9 |
|---|---|
| 17 # print("Protocole non conforme, ce script doit etre lance uniquement pour un protocole Routier ou Pedestre") | 17 # print("Protocole non conforme, ce script doit etre lance uniquement pour un protocole Routier ou Pedestre") |
| 18 print("Wrong protocol, please only use this tool for a \'Pedestre\' or \'Routier\' protocol.") | 18 print("Wrong protocol, please only use this tool for a \'Pedestre\' or \'Routier\' protocol.") |
| 19 }else{ | 19 }else{ |
| 20 | 20 |
| 21 refRP=fread(args[2],encoding="UTF-8") | 21 refRP=fread(args[2],encoding="UTF-8") |
| 22 GroupList=fread(args[3],encoding="Latin-1") | 22 GroupList=fread(args[3],encoding="UTF-8") |
| 23 | 23 |
| 24 IdC2$ConfV[is.na(IdC2$ConfV)]="" | 24 IdC2$ConfV[is.na(IdC2$ConfV)]="" |
| 25 | 25 |
| 26 | 26 |
| 27 Routier=grepl("-",substr(IdC2$`nom du fichier`[1],4,7)) | 27 Routier=grepl("-",substr(IdC2$`nom du fichier`[1],4,7)) |