Mercurial > repos > ecology > xarray_coords_info
comparison xarray_coords_info.xml @ 3:663e6f115a76 draft default tip
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/data_manipulation/xarray/ commit fd8ad4d97db7b1fd3876ff63e14280474e06fdf7
author | ecology |
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date | Sun, 31 Jul 2022 21:21:20 +0000 |
parents | 3e73f657a998 |
children |
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2:3e73f657a998 | 3:663e6f115a76 |
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4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
5 </macros> | 5 </macros> |
6 <expand macro="edam_ontology"/> | 6 <expand macro="edam_ontology"/> |
7 <requirements> | 7 <requirements> |
8 <requirement type="package" version="@TOOL_VERSION@">xarray</requirement> | 8 <requirement type="package" version="@TOOL_VERSION@">xarray</requirement> |
9 <requirement type="package" version="3">python</requirement> | 9 <requirement type="package" version="3.10">python</requirement> |
10 <requirement type="package" version="1.5.6">netcdf4</requirement> | 10 <requirement type="package" version="1.6.0">netcdf4</requirement> |
11 <requirement type="package" version="0.9.0">geopandas</requirement> | 11 <requirement type="package" version="1.4.3">pandas</requirement> |
12 <requirement type="package" version="1.7.1">shapely</requirement> | |
13 </requirements> | 12 </requirements> |
14 <command detect_errors="exit_code"><![CDATA[ | 13 <command detect_errors="exit_code"><![CDATA[ |
15 mkdir output_dir && | 14 mkdir output_dir && |
16 echo "Galaxy xarray version @TOOL_VERSION@"> output_dir/version.tabular && | 15 echo "Galaxy xarray version @TOOL_VERSION@"> output_dir/version.tabular && |
17 python3 '$__tool_directory__/xarray_tool.py' '$input' --coords_info output_dir | 16 python3 '$__tool_directory__/xarray_info.py' '$input' --coords_info output_dir |
18 ]]> </command> | 17 ]]> </command> |
19 <inputs> | 18 <inputs> |
20 <param type="data" name="input" label="Netcdf file" format="netcdf,h5" help="Netcdf file you need to extract coordinate values."/> | 19 <param type="data" name="input" label="Netcdf file" format="netcdf,h5" help="Netcdf file you need to extract coordinate values."/> |
21 </inputs> | 20 </inputs> |
22 <outputs> | 21 <outputs> |