comparison xarray_coords_info.xml @ 3:663e6f115a76 draft default tip

planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/data_manipulation/xarray/ commit fd8ad4d97db7b1fd3876ff63e14280474e06fdf7
author ecology
date Sun, 31 Jul 2022 21:21:20 +0000
parents 3e73f657a998
children
comparison
equal deleted inserted replaced
2:3e73f657a998 3:663e6f115a76
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="edam_ontology"/> 6 <expand macro="edam_ontology"/>
7 <requirements> 7 <requirements>
8 <requirement type="package" version="@TOOL_VERSION@">xarray</requirement> 8 <requirement type="package" version="@TOOL_VERSION@">xarray</requirement>
9 <requirement type="package" version="3">python</requirement> 9 <requirement type="package" version="3.10">python</requirement>
10 <requirement type="package" version="1.5.6">netcdf4</requirement> 10 <requirement type="package" version="1.6.0">netcdf4</requirement>
11 <requirement type="package" version="0.9.0">geopandas</requirement> 11 <requirement type="package" version="1.4.3">pandas</requirement>
12 <requirement type="package" version="1.7.1">shapely</requirement>
13 </requirements> 12 </requirements>
14 <command detect_errors="exit_code"><![CDATA[ 13 <command detect_errors="exit_code"><![CDATA[
15 mkdir output_dir && 14 mkdir output_dir &&
16 echo "Galaxy xarray version @TOOL_VERSION@"> output_dir/version.tabular && 15 echo "Galaxy xarray version @TOOL_VERSION@"> output_dir/version.tabular &&
17 python3 '$__tool_directory__/xarray_tool.py' '$input' --coords_info output_dir 16 python3 '$__tool_directory__/xarray_info.py' '$input' --coords_info output_dir
18 ]]> </command> 17 ]]> </command>
19 <inputs> 18 <inputs>
20 <param type="data" name="input" label="Netcdf file" format="netcdf,h5" help="Netcdf file you need to extract coordinate values."/> 19 <param type="data" name="input" label="Netcdf file" format="netcdf,h5" help="Netcdf file you need to extract coordinate values."/>
21 </inputs> 20 </inputs>
22 <outputs> 21 <outputs>