Mercurial > repos > eiriche > bsmap
annotate bsmap_fasta.loc.sample @ 2:41f30b042bac draft
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| author | eiriche |
|---|---|
| date | Thu, 29 Nov 2012 10:10:03 -0500 |
| parents | |
| children |
| rev | line source |
|---|---|
| 2 | 1 #This is a sample file distributed with Galaxy that enables BSMAP |
| 2 #to use a directory of reference FastA sequences data files.The bsmap_fasta.loc | |
| 3 #file has this format (longer white space characters are TAB characters): | |
| 4 # | |
| 5 #<unique_build_id> <dbkey> <display_name> <file_path> | |
| 6 # | |
| 7 # | |
| 8 #Your bsmap_fasta.loc file should include an entry per line for each | |
| 9 reference you have stored. For example: | |
| 10 # | |
| 11 #phiX174 phiX phiX174 /depot/data2/galaxy/phiX/base/phiX.fasta | |
| 12 #hg18canon hg18 hg18 Canonical /depot/data2/galaxy/hg18/base/hg18canon.fasta | |
| 13 #hg18full hg18 hg18 Full /depot/data2/galaxy/hg18/base/hg18full.fasta | |
| 14 #/orig/path/hg19.fa hg19 hg19 /depot/data2/galaxy/hg19/base/hg19.fasta | |
| 15 #...etc... | |
| 16 # |