Mercurial > repos > eiriche > bsmap
comparison bsmap_fasta.loc.sample @ 12:2ff1bef33bdd draft
Uploaded
author | eiriche |
---|---|
date | Fri, 30 Nov 2012 09:14:49 -0500 |
parents | 41f30b042bac |
children |
comparison
equal
deleted
inserted
replaced
11:413c742682f7 | 12:2ff1bef33bdd |
---|---|
1 #This is a sample file distributed with Galaxy that enables BSMAP | |
2 #to use a directory of reference FastA sequences data files.The bsmap_fasta.loc | |
3 #file has this format (longer white space characters are TAB characters): | |
4 # | |
5 #<unique_build_id> <dbkey> <display_name> <file_path> | |
6 # | |
7 # | |
8 #Your bsmap_fasta.loc file should include an entry per line for each | |
9 reference you have stored. For example: | |
10 # | |
11 #phiX174 phiX phiX174 /depot/data2/galaxy/phiX/base/phiX.fasta | |
12 #hg18canon hg18 hg18 Canonical /depot/data2/galaxy/hg18/base/hg18canon.fasta | |
13 #hg18full hg18 hg18 Full /depot/data2/galaxy/hg18/base/hg18full.fasta | |
14 #/orig/path/hg19.fa hg19 hg19 /depot/data2/galaxy/hg19/base/hg19.fasta | |
15 #...etc... | |
16 # |