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view bsmap_fasta.loc.sample @ 4:e5025e0378d0 draft

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author eiriche
date Thu, 29 Nov 2012 10:10:39 -0500
parents 41f30b042bac
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#This is a sample file distributed with Galaxy that enables BSMAP
#to use a directory of reference FastA sequences data files.The bsmap_fasta.loc
#file has this format (longer white space characters are TAB characters):
#
#<unique_build_id>   <dbkey>   <display_name>   <file_path>
#
#
#Your bsmap_fasta.loc file should include an entry per line for each
reference you have stored. For example:
#
#phiX174              phiX   phiX174          /depot/data2/galaxy/phiX/base/phiX.fasta
#hg18canon            hg18   hg18 Canonical   /depot/data2/galaxy/hg18/base/hg18canon.fasta
#hg18full             hg18   hg18 Full        /depot/data2/galaxy/hg18/base/hg18full.fasta
#/orig/path/hg19.fa   hg19   hg19             /depot/data2/galaxy/hg19/base/hg19.fasta
#...etc...
#