# HG changeset patch # User eiriche # Date 1354201803 18000 # Node ID 41f30b042bac564d6aed7940cd696ac983fd42ea # Parent f372b073e26c658ee20a81d625568856372e3b36 Uploaded diff -r f372b073e26c -r 41f30b042bac bsmap_fasta.loc.sample --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/bsmap_fasta.loc.sample Thu Nov 29 10:10:03 2012 -0500 @@ -0,0 +1,16 @@ +#This is a sample file distributed with Galaxy that enables BSMAP +#to use a directory of reference FastA sequences data files.The bsmap_fasta.loc +#file has this format (longer white space characters are TAB characters): +# +# +# +# +#Your bsmap_fasta.loc file should include an entry per line for each +reference you have stored. For example: +# +#phiX174 phiX phiX174 /depot/data2/galaxy/phiX/base/phiX.fasta +#hg18canon hg18 hg18 Canonical /depot/data2/galaxy/hg18/base/hg18canon.fasta +#hg18full hg18 hg18 Full /depot/data2/galaxy/hg18/base/hg18full.fasta +#/orig/path/hg19.fa hg19 hg19 /depot/data2/galaxy/hg19/base/hg19.fasta +#...etc... +#