Mercurial > repos > engineson > multiqc
annotate test-data/tophat_data.txt @ 15:d6579f50e622 draft
Uploaded
author | engineson |
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date | Mon, 24 Jul 2017 08:42:27 -0400 |
parents | 8f25feb85166 |
children |
rev | line source |
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0
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
1 Left reads: |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
2 Input : 316390 |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
3 Mapped : 314921 (99.5% of input) |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
4 of these: 5715 ( 1.8%) have multiple alignments (0 have >20) |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
5 Right reads: |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
6 Input : 316390 |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
7 Mapped : 314789 (99.5% of input) |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
8 of these: 5707 ( 1.8%) have multiple alignments (0 have >20) |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
9 99.5% overall read mapping rate. |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
10 |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
11 Aligned pairs: 313405 |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
12 of these: 5638 ( 1.8%) have multiple alignments |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
13 34 ( 0.0%) are discordant alignments |
8f25feb85166
planemo upload for repository https://github.com/EnginesOn/galaxy_tools/tree/master/tools/multiqc commit 1110117e9b07da7913ea4480566a00d1bb373531-dirty
engineson
parents:
diff
changeset
|
14 99.0% concordant pair alignment rate. |