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comparison test-data/rnastar_log.txt @ 8:c503e1c1fbad draft

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author engineson
date Thu, 25 May 2017 17:51:17 -0400
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7:4612d775965f 8:c503e1c1fbad
1 Started job on | Mar 01 15:53:05
2 Started mapping on | Mar 01 15:53:08
3 Finished on | Mar 01 15:53:08
4 Mapping speed, Million of reads per hour | inf
5
6 Number of input reads | 100
7 Average input read length | 75
8 UNIQUE READS:
9 Uniquely mapped reads number | 89
10 Uniquely mapped reads % | 89.00%
11 Average mapped length | 74.80
12 Number of splices: Total | 47
13 Number of splices: Annotated (sjdb) | 0
14 Number of splices: GT/AG | 47
15 Number of splices: GC/AG | 0
16 Number of splices: AT/AC | 0
17 Number of splices: Non-canonical | 0
18 Mismatch rate per base, % | 1.73%
19 Deletion rate per base | 0.00%
20 Deletion average length | 0.00
21 Insertion rate per base | 0.00%
22 Insertion average length | 0.00
23 MULTI-MAPPING READS:
24 Number of reads mapped to multiple loci | 1
25 % of reads mapped to multiple loci | 1.00%
26 Number of reads mapped to too many loci | 0
27 % of reads mapped to too many loci | 0.00%
28 UNMAPPED READS:
29 % of reads unmapped: too many mismatches | 0.00%
30 % of reads unmapped: too short | 10.00%
31 % of reads unmapped: other | 0.00%
32 CHIMERIC READS:
33 Number of chimeric reads | 0
34 % of chimeric reads | 0.00%