Mercurial > repos > engineson > multiqc
comparison tmpprV1hM @ 11:e18704835dfd draft
Updated from github with appropriate url
author | engineson |
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date | Fri, 07 Jul 2017 07:56:04 -0400 |
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494 <div id="readme" class="readme boxed-group clearfix announce instapaper_body rst"> | |
495 <h3> | |
496 <svg aria-hidden="true" class="octicon octicon-book" height="16" version="1.1" viewBox="0 0 16 16" width="16"><path fill-rule="evenodd" d="M3 5h4v1H3V5zm0 3h4V7H3v1zm0 2h4V9H3v1zm11-5h-4v1h4V5zm0 2h-4v1h4V7zm0 2h-4v1h4V9zm2-6v9c0 .55-.45 1-1 1H9.5l-1 1-1-1H2c-.55 0-1-.45-1-1V3c0-.55.45-1 1-1h5.5l1 1 1-1H15c.55 0 1 .45 1 1zm-8 .5L7.5 3H2v9h6V3.5zm7-.5H9.5l-.5.5V12h6V3z"/></svg> | |
497 readme.rst | |
498 </h3> | |
499 | |
500 <article class="markdown-body entry-content" itemprop="text"><a name="user-content-galaxy-multiqc-wrapper"></a> | |
501 <h2><a id="user-content-galaxy-multiqc-wrapper" class="anchor" href="#galaxy-multiqc-wrapper" aria-hidden="true"><svg aria-hidden="true" class="octicon octicon-link" height="16" version="1.1" viewBox="0 0 16 16" width="16"><path fill-rule="evenodd" d="M4 9h1v1H4c-1.5 0-3-1.69-3-3.5S2.55 3 4 3h4c1.45 0 3 1.69 3 3.5 0 1.41-.91 2.72-2 3.25V8.59c.58-.45 1-1.27 1-2.09C10 5.22 8.98 4 8 4H4c-.98 0-2 1.22-2 2.5S3 9 4 9zm9-3h-1v1h1c1 0 2 1.22 2 2.5S13.98 12 13 12H9c-.98 0-2-1.22-2-2.5 0-.83.42-1.64 1-2.09V6.25c-1.09.53-2 1.84-2 3.25C6 11.31 7.55 13 9 13h4c1.45 0 3-1.69 3-3.5S14.5 6 13 6z"></path></svg></a>Galaxy multiqc wrapper</h2> | |
502 <p>Aggregate results from bioinformatics analyses across many samples into a single report</p> | |
503 <p>MultiQC searches a given directory for analysis logs and compiles a HTML report. It's a general use tool, perfect for summarising the output from numerous bioinformatics tools.</p> | |
504 <a name="user-content-installation"></a> | |
505 <h2><a id="user-content-installation" class="anchor" href="#installation" aria-hidden="true"><svg aria-hidden="true" class="octicon octicon-link" height="16" version="1.1" viewBox="0 0 16 16" width="16"><path fill-rule="evenodd" d="M4 9h1v1H4c-1.5 0-3-1.69-3-3.5S2.55 3 4 3h4c1.45 0 3 1.69 3 3.5 0 1.41-.91 2.72-2 3.25V8.59c.58-.45 1-1.27 1-2.09C10 5.22 8.98 4 8 4H4c-.98 0-2 1.22-2 2.5S3 9 4 9zm9-3h-1v1h1c1 0 2 1.22 2 2.5S13.98 12 13 12H9c-.98 0-2-1.22-2-2.5 0-.83.42-1.64 1-2.09V6.25c-1.09.53-2 1.84-2 3.25C6 11.31 7.55 13 9 13h4c1.45 0 3-1.69 3-3.5S14.5 6 13 6z"></path></svg></a>Installation</h2> | |
506 <p>Requirements: pkg-config</p> | |
507 <p>Conda recipe: A conda recipe exists in bioconda repository. If you have a recent Galaxy release, the packages installation is not mandatory.</p> | |
508 <a name="user-content-multiqc-webpage"></a> | |
509 <h2><a id="user-content-multiqc-webpage" class="anchor" href="#multiqc-webpage" aria-hidden="true"><svg aria-hidden="true" class="octicon octicon-link" height="16" version="1.1" viewBox="0 0 16 16" width="16"><path fill-rule="evenodd" d="M4 9h1v1H4c-1.5 0-3-1.69-3-3.5S2.55 3 4 3h4c1.45 0 3 1.69 3 3.5 0 1.41-.91 2.72-2 3.25V8.59c.58-.45 1-1.27 1-2.09C10 5.22 8.98 4 8 4H4c-.98 0-2 1.22-2 2.5S3 9 4 9zm9-3h-1v1h1c1 0 2 1.22 2 2.5S13.98 12 13 12H9c-.98 0-2-1.22-2-2.5 0-.83.42-1.64 1-2.09V6.25c-1.09.53-2 1.84-2 3.25C6 11.31 7.55 13 9 13h4c1.45 0 3-1.69 3-3.5S14.5 6 13 6z"></path></svg></a>MultiQC webpage</h2> | |
510 <p>Important: For a good view of multiqc webpage, you need to deactivate the sanitize_all_html option in galaxy.ini</p> | |
511 <blockquote> | |
512 sanitize_all_html = False</blockquote> | |
513 <a name="user-content-history"></a> | |
514 <h2><a id="user-content-history" class="anchor" href="#history" aria-hidden="true"><svg aria-hidden="true" class="octicon octicon-link" height="16" version="1.1" viewBox="0 0 16 16" width="16"><path fill-rule="evenodd" d="M4 9h1v1H4c-1.5 0-3-1.69-3-3.5S2.55 3 4 3h4c1.45 0 3 1.69 3 3.5 0 1.41-.91 2.72-2 3.25V8.59c.58-.45 1-1.27 1-2.09C10 5.22 8.98 4 8 4H4c-.98 0-2 1.22-2 2.5S3 9 4 9zm9-3h-1v1h1c1 0 2 1.22 2 2.5S13.98 12 13 12H9c-.98 0-2-1.22-2-2.5 0-.83.42-1.64 1-2.09V6.25c-1.09.53-2 1.84-2 3.25C6 11.31 7.55 13 9 13h4c1.45 0 3-1.69 3-3.5S14.5 6 13 6z"></path></svg></a>History</h2> | |
515 <blockquote> | |
516 <ul> | |
517 <li>v1.0.0.0 Update to multiQC 1.0, add additional supported tools</li> | |
518 <li>v0.6: Initial public release</li> | |
519 </ul> | |
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523 <p>Created by EnginesOn company</p> | |
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