Mercurial > repos > engineson > multiqc
diff test-data/samtools_flagstat.txt @ 8:c503e1c1fbad draft
Uploaded
| author | engineson |
|---|---|
| date | Thu, 25 May 2017 17:51:17 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/samtools_flagstat.txt Thu May 25 17:51:17 2017 -0400 @@ -0,0 +1,13 @@ +21040602 + 0 in total (QC-passed reads + QC-failed reads) +0 + 0 secondary +0 + 0 supplementary +5448463 + 0 duplicates +20689039 + 0 mapped (98.33%:-nan%) +0 + 0 paired in sequencing +0 + 0 read1 +0 + 0 read2 +0 + 0 properly paired (-nan%:-nan%) +0 + 0 with itself and mate mapped +0 + 0 singletons (-nan%:-nan%) +0 + 0 with mate mapped to a different chr +0 + 0 with mate mapped to a different chr (mapQ>=5)