Mercurial > repos > engineson > multiqc
view test-data/cutadapt.txt @ 9:919983d780e0 draft
Updated from github
author | engineson |
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date | Fri, 07 Jul 2017 07:54:00 -0400 |
parents | 8f25feb85166 |
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You are running cutadapt 1.6 with Python 2.7.3 Command line parameters: --format=fastq --anywhere=fakadaptater=CACG --error-rate=0.1 --times=1 --overlap=3 --output=/omaha-beach/cloud_26/files/000/dataset_82.dat /omaha-beach/cloud_26/files/000/dataset_33.dat Maximum error rate: 10.00% No. of adapters: 1 Processed reads: 316390 Processed bases: 31955390 bp (32.0 Mbp) Trimmed reads: 68795 (21.7%) Trimmed bases: 3443775 bp (3.4 Mbp) (10.78% of total) Too short reads: 0 (0.0% of processed reads) Too long reads: 0 (0.0% of processed reads) Total time: 5.28 s Time per read: 0.017 ms === Adapter 'fakadaptater' === Sequence: CACG; Length: 4; Trimmed: 68795 times. 2162 times, it overlapped the 5' end of a read 66633 times, it overlapped the 3' end or was within the read No. of allowed errors: 0-4 bp: 0 Overview of removed sequences (5') length count expect max.err error counts 3 357 4943.6 0 357 4 1805 1235.9 0 1805 Overview of removed sequences (3' or within) length count expect max.err error counts 3 4175 4943.6 0 4175 4 520 1235.9 0 520 5 442 1235.9 0 442 6 522 1235.9 0 522 7 538 1235.9 0 538 8 526 1235.9 0 526 9 482 1235.9 0 482 10 547 1235.9 0 547 11 502 1235.9 0 502 12 539 1235.9 0 539 13 571 1235.9 0 571 14 601 1235.9 0 601 15 537 1235.9 0 537 16 592 1235.9 0 592 17 604 1235.9 0 604 18 617 1235.9 0 617 19 594 1235.9 0 594 20 493 1235.9 0 493 21 558 1235.9 0 558 22 503 1235.9 0 503 23 573 1235.9 0 573 24 609 1235.9 0 609 25 653 1235.9 0 653 26 625 1235.9 0 625 27 541 1235.9 0 541 28 501 1235.9 0 501 29 618 1235.9 0 618 30 539 1235.9 0 539 31 614 1235.9 0 614 32 594 1235.9 0 594 33 627 1235.9 0 627 34 572 1235.9 0 572 35 690 1235.9 0 690 36 615 1235.9 0 615 37 654 1235.9 0 654 38 681 1235.9 0 681 39 530 1235.9 0 530 40 731 1235.9 0 731 41 622 1235.9 0 622 42 611 1235.9 0 611 43 722 1235.9 0 722 44 664 1235.9 0 664 45 659 1235.9 0 659 46 651 1235.9 0 651 47 591 1235.9 0 591 48 642 1235.9 0 642 49 545 1235.9 0 545 50 573 1235.9 0 573 51 591 1235.9 0 591 52 567 1235.9 0 567 53 749 1235.9 0 749 54 647 1235.9 0 647 55 753 1235.9 0 753 56 696 1235.9 0 696 57 780 1235.9 0 780 58 607 1235.9 0 607 59 758 1235.9 0 758 60 643 1235.9 0 643 61 578 1235.9 0 578 62 670 1235.9 0 670 63 652 1235.9 0 652 64 816 1235.9 0 816 65 732 1235.9 0 732 66 640 1235.9 0 640 67 644 1235.9 0 644 68 818 1235.9 0 818 69 658 1235.9 0 658 70 587 1235.9 0 587 71 672 1235.9 0 672 72 588 1235.9 0 588 73 645 1235.9 0 645 74 668 1235.9 0 668 75 725 1235.9 0 725 76 651 1235.9 0 651 77 701 1235.9 0 701 78 662 1235.9 0 662 79 655 1235.9 0 655 80 760 1235.9 0 760 81 746 1235.9 0 746 82 705 1235.9 0 705 83 704 1235.9 0 704 84 726 1235.9 0 726 85 692 1235.9 0 692 86 700 1235.9 0 700 87 758 1235.9 0 758 88 640 1235.9 0 640 89 665 1235.9 0 665 90 848 1235.9 0 848 91 693 1235.9 0 693 92 775 1235.9 0 775 93 1237 1235.9 0 1237 94 629 1235.9 0 629 95 574 1235.9 0 574 96 525 1235.9 0 525 97 586 1235.9 0 586 98 696 1235.9 0 696 99 860 1235.9 0 860 100 851 1235.9 0 851