Mercurial > repos > enios > nc_rna
annotate discardfasta.xml @ 20:d0315b7807fe draft
Uploaded
| author | enios |
|---|---|
| date | Sat, 22 May 2021 07:36:29 +0000 |
| parents | 97abe4dc3ee3 |
| children |
| rev | line source |
|---|---|
| 15 | 1 <tool id="discardfasta" name="discardFasta" > |
| 2 <description>"discard_fasta_sequences_less_than_specific_length"</description> | |
| 3 <requirements> | |
| 4 <container type="docker">bianca7/lncrna:discard_fasta</container> | |
| 5 </requirements> | |
| 6 <command><![CDATA[perl /discard_fasta.pl $length $fasta_file > $out | |
| 7 ]]></command> | |
| 8 <inputs> | |
| 9 <param type="data" name="fasta_file" format="fasta" /> | |
| 10 <param type="integer" value="200" name="length" label="length cut off" /> | |
| 11 </inputs> | |
| 12 <outputs> | |
| 13 <data name="out" format="fasta" /> | |
| 14 </outputs> | |
| 15 </tool> | |
| 16 | |
| 17 |