Mercurial > repos > enios > nc_rna
comparison csv2json.xml @ 7:66387d7a2baf draft
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| author | enios |
|---|---|
| date | Wed, 21 Apr 2021 11:13:06 +0000 |
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| children |
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| 6:f4dea7954ab6 | 7:66387d7a2baf |
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| 1 <tool id="csv2json" name="csv2json" > | |
| 2 <requirements> | |
| 3 <container type="docker">bianca7/lncrna:csv2json</container> | |
| 4 </requirements> | |
| 5 <description>CSV to JSON for Cytoscape.js visualization</description> | |
| 6 <command><![CDATA[ python /code/csv2json.py --file "$input" && cp *.json "$output" | |
| 7 ]]></command> | |
| 8 <inputs> | |
| 9 <param name="input" type="data" label="CSV input (rnaInteractions output)"/> | |
| 10 </inputs> | |
| 11 <outputs> | |
| 12 <data name="output" format="json"/> | |
| 13 </outputs> | |
| 14 </tool> | |
| 15 |