Mercurial > repos > enios > nc_rna
view ezlncpred.xml @ 11:606b4c26156b draft
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author | enios |
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date | Sun, 16 May 2021 12:16:03 +0000 |
parents | f4dea7954ab6 |
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<tool id="ezlncpred" name="ezLncPred" > <description>"ezLncPred"</description> <requirements> <container type="docker">eniosorg/bim:ezlncpred</container> </requirements> <command><![CDATA[ezLncPred -i $fasta_file -o out $model #if $model =="CPAT" -p Human #end if #if $model =="CPPred" -p Human #end if #if $model =="longdist" -z 200 -p Human #end if && mv out $out ]]></command> <inputs> <param type="data" name="fasta_file" format="fasta" /> <param type="select" name="model"> <!--option value="CNCI">CNCI</option> <option value="CPC2">CPC2</option--> <option value="CPAT">CPAT</option> <option value="lgc">lgc</option> <option value="CPPred">CPPred</option> <!--option value="GFStack">GFStack</option--> <option value="longdist">longdist</option> <!--option value="PLEK">PLEK</option> <option value="LncADeep">LncDeep</option--> </param> </inputs> <outputs> <data name="out" format="txt" from_work_directory="out"/> </outputs> </tool>