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view discardfasta.xml @ 22:6b4bbce1abb0 draft

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author enios
date Wed, 26 May 2021 16:13:40 +0000
parents 97abe4dc3ee3
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<tool id="discardfasta" name="discardFasta" >
    <description>"discard_fasta_sequences_less_than_specific_length"</description>
    <requirements>
        <container type="docker">bianca7/lncrna:discard_fasta</container>
    </requirements>
    <command><![CDATA[perl /discard_fasta.pl $length $fasta_file > $out
   ]]></command>
   <inputs>
     <param type="data" name="fasta_file" format="fasta" />
     <param type="integer" value="200" name="length" label="length cut off" />
  </inputs>
  <outputs>
    <data name="out" format="fasta" />
  </outputs>
</tool>