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view csv2json.xml @ 9:dadf143294bb draft

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author enios
date Wed, 21 Apr 2021 15:03:25 +0000
parents 66387d7a2baf
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<tool id="csv2json" name="csv2json" >
<requirements>
	<container type="docker">bianca7/lncrna:csv2json</container>
</requirements>
<description>CSV to JSON for Cytoscape.js visualization</description>
<command><![CDATA[ python /code/csv2json.py --file "$input" && cp *.json "$output"
]]></command>
<inputs>
	<param name="input" type="data" label="CSV input (rnaInteractions output)"/>
</inputs>
<outputs>
	<data name="output" format="json"/>
</outputs>
</tool>