Mercurial > repos > enios > nc_rna

changeset 9:dadf143294bb draft

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Deleted selected files
author enios
date Wed, 21 Apr 2021 15:03:25 +0000
parents 9ad10a3a5759
children 2ea01f4f394c
files lncadeep.xml
diffstat 1 files changed, 0 insertions(+), 20 deletions(-) [+]
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line diff
--- a/lncadeep.xml	Wed Apr 21 11:13:27 2021 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,20 +0,0 @@
-<tool id="lncadeep" name="LncADeep" >
-    <description>"LncADeep"</description>
-    <requirements>
-        <container type="docker">bianca7/lncadeep</container>
-    </requirements>
-    <command><![CDATA[python /usr/local/lib/python2.7/site-packages/LncADeep/LncADeep.py -MODE anno
-      -o test
-      -l $RNA_FILE
-      -p $PROTEIN_FILE
-      -a 1
-      && tar -cvf results.tar test_LncADeep_anno_results && mv results.tar $results
-    ]]></command>
-    <inputs>
-        <param type="data" name="RNA_FILE" format="fasta" label="RNA  sequences in FASTA format" />
-        <param type="data" name="PROTEIN_FILE" format="fasta" label="protein sequences in FASTA format" />
-    </inputs>
-    <outputs>
-        <data name="results" format="tar" />
-    </outputs>
-</tool>