Mercurial > repos > erasmus-medical-center > dr_disco

annotate test-data/detect.txt @ 10:f2c70d589596 draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 3b03a60c8a46cc23f6fbbb9e32111b39c6044fad
author erasmus-medical-center
date Thu, 02 Nov 2017 05:17:31 -0400
parents c3ce472a315f
children
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10
f2c70d589596 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 3b03a60c8a46cc23f6fbbb9e32111b39c6044fad
erasmus-medical-center
parents: 9
diff changeset
1 chr-A pos-A direction-A pos-A-acceptor pos-A-donor chr-B pos-B direction-B pos-B-acceptor pos-B-donor genomic-distance filter-status circRNA intronic/exonic score soft+hardclips n-split-reads n-discordant-reads alignment-score mismatches n-edges n-nodes-A n-nodes-B n-splice-junc-A n-splice-junc-B entropy-bp-edge entropy-all-edges bp-pos-stddev entropy-disco-bps lr-A-slope lr-A-intercept lr-A-rvalue lr-A-pvalue lr-A-stderr lr-B-slope lr-B-intercept lr-B-rvalue lr-B-pvalue lr-B-stderr disco/split clips/score nodes/edge median-AS-A median-AS-B max-AS-A max-AS-B data-structure
f2c70d589596 planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 3b03a60c8a46cc23f6fbbb9e32111b39c6044fad
erasmus-medical-center
parents: 9
diff changeset
2 chr21 39877811 - 6 0 chr21 42873374 + 0 6 2995563 unclassified linear intronic 9 6 3 0 642 0 1 1 1 0 0 1.0000 1.0000 0.0000 0.0000 17.0000 37.3333 0.9994 0.0216 0.5774 24.0000 42.3333 0.9954 0.0611 2.3094 0.0000 0.3333 2.0000 55 69 71 89 chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(spanning_paired_1_t:3,spanning_paired_2_t:3)