Mercurial > repos > erasmus-medical-center > dr_disco
comparison dr-disco_detect.xml @ 2:173ca9768e22 draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit d29f5735b74a3919e6fc16c10435867ed4450576
| author | erasmus-medical-center |
|---|---|
| date | Fri, 28 Apr 2017 03:56:08 -0400 |
| parents | 9495360713d4 |
| children | 5348cfd3ba5c |
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| 1:9495360713d4 | 2:173ca9768e22 |
|---|---|
| 32 <output name="table_fusion_events" file="detect.txt" /> | 32 <output name="table_fusion_events" file="detect.txt" /> |
| 33 </test> | 33 </test> |
| 34 </tests> | 34 </tests> |
| 35 | 35 |
| 36 <help><![CDATA[ | 36 <help><![CDATA[ |
| 37 detects | 37 |
| 38 **What it does** | |
| 39 | |
| 40 Detects junctions in ('dr-disco fix' prepared) Chimeric alignments and tries to reconstruct fusion genes and genomic breakpoints using a Graph data structure. | |
| 41 | |
| 42 This software is in particular designed for RNA-Seq data prepared with random hexamer priming because of the presence of intronic reads. | |
| 43 | |
| 44 **Attributions** | |
| 45 | |
| 46 This work is part of Youri Hoogstrate's PhD thesis. | |
| 47 | |
| 38 ]]></help> | 48 ]]></help> |
| 39 | 49 |
| 40 <expand macro="citations"/> | 50 <expand macro="citations"/> |
| 41 </tool> | 51 </tool> |