comparison test-data/summarylog1.txt @ 0:607c5e7e0a64 draft

planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/mycrobiota commit 1c4c58018b64ff3531a719e789ce71cb0a1244c5
author erasmus-medical-center
date Wed, 13 Dec 2017 10:09:50 -0500
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-1:000000000000 0:607c5e7e0a64
1 Linux version
2
3 Using ReadLine
4
5 Running 64Bit Version
6
7 mothur v.1.36.1
8 Last updated: 7/27/2015
9
10 by
11 Patrick D. Schloss
12
13 Department of Microbiology & Immunology
14 University of Michigan
15 pschloss@umich.edu
16 http://www.mothur.org
17
18 When using, please cite:
19 Schloss, P.D., et al., Introducing mothur: Open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol, 2009. 75(23):7537-41.
20
21 Distributed under the GNU General Public License
22
23 Type 'help()' for information on the commands that are available
24
25 Type 'quit()' to exit program
26 Interactive Mode
27
28
29 mothur > summary.seqs(fasta=fasta.dat,processors=1)
30
31 Using 1 processors.
32
33 Start End NBases Ambigs Polymer NumSeqs
34 Minimum: 1 297 297 0 4 1
35 2.5%-tile: 1 299 299 0 4 16
36 25%-tile: 1 304 304 0 5 151
37 Median: 1 305 305 0 5 301
38 75%-tile: 1 305 305 0 5 451
39 97.5%-tile: 1 307 307 0 5 586
40 Maximum: 1 312 312 0 6 600
41 Mean: 1 304.715 304.715 0 4.94833
42 # of Seqs: 600
43
44 Output File Names:
45 fasta.summary
46
47 It took 0 secs to summarize 600 sequences.
48 quit
49
50 mothur > quit