Mercurial > repos > eschen42 > w4mcorcov

view README @ 6:7bd523ca1f9a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/HegemanLab/w4mcorcov_galaxy_wrapper/tree/master commit cafda5095a79ce2376325b57337302f95137195d
author eschen42
date Wed, 18 Jul 2018 12:35:55 -0400
parents 23f9fad4edfc
children
line wrap: on
line source

# w4mcorcov_galaxy_wrapper

Planemo-based galaxy-tool-wrapper to wrap a SIMCA® OPLS-DA® S-PLOT® "work-alike" tool.
This tool plots the correlation of each feature with the OPLS-DA projection of multivariate data for two classes of data against the covariance of the same.

The original plot which this tool emulates is described in:
> Wiklund, Susanne and Johansson, Erik and Sjöström, Lina and Mellerowicz, Ewa J. and Edlund, Ulf and Shockcor, John P. and Gottfries, Johan and Moritz, Thomas and Trygg, Johan (2008). Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models. In Analytical Chemistry, 80 (1), pp. 115–122. doi:10.1021/ac0713510