Mercurial > repos > estrain > amrfinderplus_db

diff data_manager_amrfinderplus/data_manager_conf.xml @ 0:5ba68abd41f6 draft

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author estrain
date Tue, 24 May 2022 11:46:19 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_amrfinderplus/data_manager_conf.xml	Tue May 24 11:46:19 2022 +0000
@@ -0,0 +1,19 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/data_manager_amrfinderplus.xml" id="data_manager_amrfinderplus">
+      <data_table name="amrfinderplus">
+        <output>
+          <column name="value" />
+          <column name="name" />
+          <column name="path" output_ref="output_file" >
+            <move type="directory" relativize_symlinks="True">
+              <src>${path}</src>
+              <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">amrfinderplus/${value}</target>
+            </move>
+            <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/amrfinderplus/${value}</value_translation>
+            <value_translation type="function">abspath</value_translation>
+          </column>
+        </output>
+      </data_table>
+    </data_manager>
+</data_managers>