Mercurial > repos > estrain > srst2

comparison srst2v2.xml @ 7:77bea815cb74 draft default tip

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author estrain
date Mon, 08 Jul 2019 21:01:28 -0400
parents ba3ddf429854
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6:ba3ddf429854 7:77bea815cb74
40 #end if 40 #end if
41 41
42 srst2 42 srst2
43 43
44 #if $paired_conditional.sPaired == "single" 44 #if $paired_conditional.sPaired == "single"
45 --input_se sample_1.fastq1 45 --input_se sample_1.fastq
46 #else 46 #else
47 --input_pe sample_1.fastq sample_2.fastq 47 --input_pe sample_1.fastq sample_2.fastq
48 #end if 48 #end if
49 49
50 --output srst2out 50 --output srst2out