diff checkformat_wrapper.R @ 2:b6a6b4cc932a draft

planemo upload for repository https://github.com/workflow4metabolomics/checkformat.git commit e17f78630b4d21b54a4edd6015d50969ac859d6b

--- a/checkformat_wrapper.R	Sat Aug 06 11:54:28 2016 -0400
+++ b/checkformat_wrapper.R	Tue Jun 06 11:51:33 2017 -0400
@@ -60,9 +60,39 @@
     cat("\nEnd of the '", modNamC, "' Galaxy module call: ",
         format(Sys.time(), "%a %d %b %Y %X"), "\n", sep="")
 
+    cat("\n\n\n============================================================================")
+    cat("\nAdditional information about the call:\n")
+    cat("\n1) Parameters:\n")
+    print(cbind(value = argVc))
+    
+    cat("\n2) Session Info:\n")
+    sessioninfo <- sessionInfo()
+    cat(sessioninfo$R.version$version.string,"\n")
+    cat("Main packages:\n")
+    for (pkg in names(sessioninfo$otherPkgs)) { cat(paste(pkg,packageVersion(pkg)),"\t") }; cat("\n")
+    cat("Other loaded packages:\n")
+    for (pkg in names(sessioninfo$loadedOnly)) { cat(paste(pkg,packageVersion(pkg)),"\t") }; cat("\n")
+    
+    cat("============================================================================\n")
+    
     sink()
-
+    
 } else {
+    
+    cat("\n\n\n============================================================================")
+    cat("\nAdditional information about the call:\n")
+    cat("\n1) Parameters:\n")
+    print(cbind(value = argVc))
+    
+    cat("\n2) Session Info:\n")
+    sessioninfo <- sessionInfo()
+    cat(sessioninfo$R.version$version.string,"\n")
+    cat("Main packages:\n")
+    for (pkg in names(sessioninfo$otherPkgs)) { cat(paste(pkg,packageVersion(pkg)),"\t") }; cat("\n")
+    cat("Other loaded packages:\n")
+    for (pkg in names(sessioninfo$loadedOnly)) { cat(paste(pkg,packageVersion(pkg)),"\t") }; cat("\n")
+    
+    cat("============================================================================\n")
 
     sink()
     stop("Please check the generated 'information' file")