Mercurial > repos > ethevenot > heatmap
view tests/heatmap_tests.R @ 0:ad06aeed02c9 draft
planemo upload for repository https://github.com/workflow4metabolomics/heatmap.git commit 7e599d006e53fefb7e1b923ba8894b4fb19f9cfa-dirty
author | ethevenot |
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date | Tue, 02 Aug 2016 06:26:41 -0400 |
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test_input_cut4 <- function() { testDirC <- "input" argLs <- list(disC = "1-cor", cutSamN = "4", cutVarN = "3", corMetC = "spearman", aggMetC = "ward", colC = "blueOrangeRed", scaL = "TRUE", cexN = "0.8") argLs <- c(defaultArgF(testDirC), argLs) outLs <- wrapperCallF(argLs) checkEqualsNumeric(outLs[['samDF']][13, 'heat_clust'], 4) } test_exa1_cut3 <- function() { testDirC <- "exa1" argLs <- list(disC = "1-cor", cutSamN = "3", cutVarN = "4", corMetC = "spearman", aggMetC = "ward", colC = "blueOrangeRed", scaL = "TRUE", cexN = "1") argLs <- c(defaultArgF(testDirC), argLs) outLs <- wrapperCallF(argLs) checkEqualsNumeric(outLs[['varDF']]['V24', 'heat_clust'], 4) } test_exa2_cut4 <- function() { testDirC <- "exa2" argLs <- list(disC = "1-cor", cutSamN = "1", cutVarN = "1", corMetC = "spearman", aggMetC = "ward", colC = "blueOrangeRed", scaL = "TRUE", cexN = "1") argLs <- c(defaultArgF(testDirC), argLs) outLs <- wrapperCallF(argLs) checkEquals(outLs[['varDF']]['V31', 'meta2'], 'AM') }