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planemo upload for repository https://github.com/workflow4metabolomics/multivariate.git commit dbdc8c3e17ea6ef7139e77cbb6130de949ea2a05
author ethevenot
date Sat, 30 Jul 2016 12:31:20 -0400
parents fafba524dca6
children fa173e12e185
comparison
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6 Status: [![Build Status](https://travis-ci.org/workflow4metabolomics/multivariate.svg?branch=master)](https://travis-ci.org/workflow4metabolomics/multivariate). 6 Status: [![Build Status](https://travis-ci.org/workflow4metabolomics/multivariate.svg?branch=master)](https://travis-ci.org/workflow4metabolomics/multivariate).
7 7
8 ## Description 8 ## Description
9 9
10 **Version:** 2.3.2 10 **Version:** 2.3.4
11 **Date:** 2016-05-15 11 **Date:** 2016-07-30
12 **Author:** Etienne A. Thevenot (CEA, LIST, MetaboHUB, W4M Core Development Team) 12 **Author:** Etienne A. Thevenot (CEA, LIST, MetaboHUB, W4M Core Development Team)
13 **Email:** [etienne.thevenot(at)cea.fr](mailto:etienne.thevenot@cea.fr) 13 **Email:** [etienne.thevenot(at)cea.fr](mailto:etienne.thevenot@cea.fr)
14 **Citation:** Thevenot E.A., Roux A., Xu Y., Ezan E. and Junot C. (2015). Analysis of the human adult urinary metabolome variations with age, body mass index and gender by implementing a comprehensive workflow for univariate and OPLS statistical analyses. *Journal of Proteome Research*, **14**:3322-3335. [doi:10.1021/acs.jproteome.5b00354](http://dx.doi.org/10.1021/acs.jproteome.5b00354) 14 **Citation:** Thevenot E.A., Roux A., Xu Y., Ezan E. and Junot C. (2015). Analysis of the human adult urinary metabolome variations with age, body mass index and gender by implementing a comprehensive workflow for univariate and OPLS statistical analyses. *Journal of Proteome Research*, **14**:3322-3335. [doi:10.1021/acs.jproteome.5b00354](http://dx.doi.org/10.1021/acs.jproteome.5b00354)
15 **Licence:** CeCILL 15 **Licence:** CeCILL
16 **Reference history:** [W4M00001a_sacurine-subset-statistics](http://galaxy.workflow4metabolomics.org/history/list_published), [W4M00001b_sacurine_complete](http://galaxy.workflow4metabolomics.org/history/list_published)
16 **Funding:** Agence Nationale de la Recherche ([MetaboHUB](http://www.metabohub.fr/index.php?lang=en&Itemid=473) national infrastructure for metabolomics and fluxomics, ANR-11-INBS-0010 grant) 17 **Funding:** Agence Nationale de la Recherche ([MetaboHUB](http://www.metabohub.fr/index.php?lang=en&Itemid=473) national infrastructure for metabolomics and fluxomics, ANR-11-INBS-0010 grant)
17 18
18 ## Installation 19 ## Installation
19 20
20 * Configuration file: `multivariate_config.xml`. 21 * Configuration file: `multivariate_config.xml`.
30 ``` 31 ```
31 32
32 + **ropls** from Bioconductor 33 + **ropls** from Bioconductor
33 34
34 ```r 35 ```r
35 install.packages("batch", dep=TRUE)
36 source("http://www.bioconductor.org/biocLite.R") 36 source("http://www.bioconductor.org/biocLite.R")
37 biocLite("ropls") 37 biocLite("ropls")
38 ``` 38 ```
39 39
40 ## Tests 40 ## Tests
45 ```r 45 ```r
46 install.packages('RUnit', dependencies = TRUE) 46 install.packages('RUnit', dependencies = TRUE)
47 ``` 47 ```
48 48
49 ## News 49 ## News
50
51 ### CHANGES IN VERSION 2.3.4
52
53 INTERNAL MODIFICATION
54
55 * minor update of .shed.yml
56
57 ***
50 58
51 ### CHANGES IN VERSION 2.3.2 59 ### CHANGES IN VERSION 2.3.2
52 60
53 INTERNAL MODIFICATION 61 INTERNAL MODIFICATION
54 62