Mercurial > repos > ethevenot > multivariate
comparison multivariate_wrapper.R @ 3:e91de3b04320 draft
planemo upload for repository https://github.com/workflow4metabolomics/multivariate.git commit bb92582ec396fd845b49454c4cadd86fbfc73fab
author | ethevenot |
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date | Sat, 22 Oct 2016 03:02:47 -0400 |
parents | fa173e12e185 |
children | 5526f8258e8a |
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2:fa173e12e185 | 3:e91de3b04320 |
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396 "_VIP_ortho") | 396 "_VIP_ortho") |
397 } | 397 } |
398 } | 398 } |
399 if(!is.null(coeMN)) { | 399 if(!is.null(coeMN)) { |
400 pCompMN <- cbind(pCompMN, coeMN) | 400 pCompMN <- cbind(pCompMN, coeMN) |
401 colnames(pCompMN)[ncol(pCompMN)] <- paste0(rspModC, "_COEFF") | 401 if(ncol(coeMN) == 1) |
402 colnames(pCompMN)[ncol(pCompMN)] <- paste0(rspModC, "_COEFF") | |
403 else | |
404 colnames(pCompMN)[(ncol(pCompMN) - ncol(coeMN) + 1):ncol(pCompMN)] <- paste0(rspModC, "_", colnames(coeMN), "-COEFF") | |
402 } | 405 } |
403 pCompDF <- as.data.frame(pCompMN)[rownames(varDF), , drop = FALSE] | 406 pCompDF <- as.data.frame(pCompMN)[rownames(varDF), , drop = FALSE] |
404 varDF <- cbind.data.frame(varDF, pCompDF) | 407 varDF <- cbind.data.frame(varDF, pCompDF) |
405 | 408 |
406 ## sampleMetadata | 409 ## sampleMetadata |