annotate build.xml @ 1:d9e05021553c draft

planemo upload for repository https://github.com/workflow4metabolomics/transformation.git commit c4b65942d74d5bdfd46e748c0040a8b5ebe4fd1d

<project name="transformation" default="all">

	<property name="tool.xml" value="transformation_config.xml"/>
	<property name="conda.dir" value="${user.home}/w4m-conda"/>

	<!--~~~
	~ ALL ~
	~~~~~-->

	<target name="all"/>

	<!--~~~~
	~ TEST ~
	~~~~~-->

	<target name="test" depends="planemo.lint,planemo.test"/>

	<!--~~~~~~~~~~~~
	~ PLANEMO LINT ~
	~~~~~~~~~~~~~-->

	<target name="planemo.lint">
		<exec executable="planemo" failonerror="true">
			<arg value="lint"/>
			<arg value="${tool.xml}"/>
		</exec>
	</target>

	<!--~~~~~~~~~~~~
	~ PLANEMO TEST ~
	~~~~~~~~~~~~~-->

	<target name="planemo.test" depends="planemo.conda.install">
		<exec executable="planemo" failonerror="true">
			<arg value="test"/>
			<arg value="--conda_prefix"/>
			<arg value="${conda.dir}"/>
			<arg value="--galaxy_branch"/>
			<arg value="release_16.01"/>
			<arg value="--conda_dependency_resolution"/>
			<arg value="${tool.xml}"/>
		</exec>
	</target>

	<!--~~~~~~~~~~~~~~~~~~~~~
	~ PLANEMO CONDA INSTALL ~
	~~~~~~~~~~~~~~~~~~~~~~-->

	<target name="planemo.conda.install" depends="planemo.conda.init">
		<exec executable="planemo" failonerror="true">
			<arg value="conda_install"/>
			<arg value="--conda_prefix"/>
			<arg value="${conda.dir}"/>
			<arg value="${tool.xml}"/>
		</exec>
	</target>

	<!--~~~~~~~~~~~~~~~~~~
	~ PLANEMO CONDA INIT ~
	~~~~~~~~~~~~~~~~~~~-->

	<target name="planemo.conda.init">
		<exec executable="planemo" failonerror="true">
			<arg value="conda_init"/>
			<arg value="--conda_prefix"/>
			<arg value="${conda.dir}"/>
		</exec>
	</target>

	<!--~~~~~
	~ CLEAN ~
	~~~~~~-->

	<target name="clean">
		<delete dir="${conda.dir}"/>
	</target>

</project>