Mercurial > repos > ethevenot > transformation
diff build.xml @ 0:eacea1349a7c draft
planemo upload for repository https://github.com/workflow4metabolomics/transformation.git commit 83f2d1045c0bf086bbe2de5204cd5c1d8354116f
author | ethevenot |
---|---|
date | Fri, 29 Jul 2016 12:11:01 -0400 |
parents | |
children | cc0e9eff0de2 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/build.xml Fri Jul 29 12:11:01 2016 -0400 @@ -0,0 +1,78 @@ +<project name="transformation" default="all"> + + <property name="tool.xml" value="transformation_config.xml"/> + <property name="conda.dir" value="${user.home}/w4m-conda"/> + + <!--~~~ + ~ ALL ~ + ~~~~~--> + + <target name="all"/> + + <!--~~~~ + ~ TEST ~ + ~~~~~--> + + <target name="test" depends="planemo.lint,planemo.test"/> + + <!--~~~~~~~~~~~~ + ~ PLANEMO LINT ~ + ~~~~~~~~~~~~~--> + + <target name="planemo.lint"> + <exec executable="planemo" failonerror="true"> + <arg value="lint"/> + <arg value="${tool.xml}"/> + </exec> + </target> + + <!--~~~~~~~~~~~~ + ~ PLANEMO TEST ~ + ~~~~~~~~~~~~~--> + + <target name="planemo.test" depends="planemo.conda.install"> + <exec executable="planemo" failonerror="true"> + <arg value="test"/> + <arg value="--conda_prefix"/> + <arg value="${conda.dir}"/> + <arg value="--galaxy_branch"/> + <arg value="release_16.01"/> + <arg value="--conda_dependency_resolution"/> + <arg value="${tool.xml}"/> + </exec> + </target> + + <!--~~~~~~~~~~~~~~~~~~~~~ + ~ PLANEMO CONDA INSTALL ~ + ~~~~~~~~~~~~~~~~~~~~~~--> + + <target name="planemo.conda.install" depends="planemo.conda.init"> + <exec executable="planemo" failonerror="true"> + <arg value="conda_install"/> + <arg value="--conda_prefix"/> + <arg value="${conda.dir}"/> + <arg value="${tool.xml}"/> + </exec> + </target> + + <!--~~~~~~~~~~~~~~~~~~ + ~ PLANEMO CONDA INIT ~ + ~~~~~~~~~~~~~~~~~~~--> + + <target name="planemo.conda.init"> + <exec executable="planemo" failonerror="true"> + <arg value="conda_init"/> + <arg value="--conda_prefix"/> + <arg value="${conda.dir}"/> + </exec> + </target> + + <!--~~~~~ + ~ CLEAN ~ + ~~~~~~--> + + <target name="clean"> + <delete dir="${conda.dir}"/> + </target> + +</project>