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comparison query.py @ 8:300e4932bad6 draft

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Uploaded 20180405
author fabio
date Thu, 05 Apr 2018 06:22:38 -0400
parents 69a3505ac594
children 1af09c5ec0a1
comparison
equal deleted inserted replaced
7:2d54890a568f 8:300e4932bad6
79 seq_id = block['sequence_id']; 79 seq_id = block['sequence_id'];
80 # put response block in the output collection 80 # put response block in the output collection
81 output_file_path = os.path.join(output_dir_path, seq_id + "_" + out_file_format); 81 output_file_path = os.path.join(output_dir_path, seq_id + "_" + out_file_format);
82 accessions_list = ""; 82 accessions_list = "";
83 hits_block = block['hits']; 83 hits_block = block['hits'];
84 accessions_dict = { }; 84 accessions_dict = { };
85 is_sabutan = False; 85 is_sabutan = False;
86 for hit in hits_block: 86 for hit in hits_block:
87 if type(hit) is dict: # sabutan 87 if type(hit) is dict: # sabutan
88 #accessions_list = accessions_list + str(hit['accession_number']) + "\t" + str(hit['score']) + "\n"; 88 #accessions_list = accessions_list + str(hit['accession_number']) + "\t" + str(hit['score']) + "\n";
89 accession_number = hit['accession_number']; 89 accession_number = hit['accession_number'];