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comparison gdcwebapp.xml @ 20:8c0633c02758 draft

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Uploaded 20170602
author fabio
date Fri, 02 Jun 2017 17:49:36 -0400
parents 2c58e3cc1b30
children 91b6d6d0b275
comparison
equal deleted inserted replaced
19:5244d3a1a441 20:8c0633c02758
12 <![CDATA[ 12 <![CDATA[
13 mkdir -p tmp && 13 mkdir -p tmp &&
14 python ${__tool_directory__}/json_data_source_mod.py "${__app__.config.output_size_limit}" --json_param_file "${output1}" --path "." --appdata "tmp" 14 python ${__tool_directory__}/json_data_source_mod.py "${__app__.config.output_size_limit}" --json_param_file "${output1}" --path "." --appdata "tmp"
15 ]]> 15 ]]>
16 </command> 16 </command>
17 <inputs check_values="False" action="http://bioinf.iasi.cnr.it/gdcwebapp/app.php" > 17 <inputs check_values="False" action="http://bioinf.iasi.cnr.it/gdcwebapp/app.php">
18 <display>Go to GDCWebApp service $GALAXY_URL</display> 18 <display>Go to GDCWebApp service $GALAXY_URL</display>
19 </inputs> 19 </inputs>
20 <outputs> 20 <outputs>
21 <data name="output1" format="auto" label="${tool.name} Output Data" hidden="True" /> 21 <data name="output1" format="auto" label="${tool.name} Output Data" />
22 <collection name="list_output" type="list:list" label="${tool.name} Output Collection"> 22 <collection name="list_output" type="list:list" label="${tool.name} Output Collection">
23 <discover_datasets pattern="(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)_(?P&lt;ext&gt;[^_]+)_(?P&lt;dbkey&gt;[^_]+)" ext="auto" visible="False" directory="tmp" /> 23 <discover_datasets pattern="(?P&lt;identifier_0&gt;[^_]+)_(?P&lt;identifier_1&gt;[^_]+)_(?P&lt;ext&gt;[^_]+)_(?P&lt;dbkey&gt;[^_]+)" ext="auto" visible="False" directory="tmp" />
24 </collection> 24 </collection>
25 </outputs> 25 </outputs>
26 <options sanitize="False" refresh="True" /> 26 <options sanitize="False" refresh="True" />