changeset 0:0ce6011d1e3b draft

Uploaded 20170531
author fabio
date Wed, 31 May 2017 10:35:52 -0400
parents
children ecc23e47ca80
files ._iris_tcga.xml ._tool_dependencies.xml iris_tcga.xml tool_dependencies.xml
diffstat 4 files changed, 30 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
Binary file ._iris_tcga.xml has changed
Binary file ._tool_dependencies.xml has changed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/iris_tcga.xml	Wed May 31 10:35:52 2017 -0400
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<tool name="IRIS-TCGA" id="data_source_iris_tcga" tool_type="data_source" hidden="False" display_interface="False" version="1.0.0">
+    <description>an intuitive interface to filter, extract, and integrate genomic experiments from The Cancer Genome Atlas</description>
+    <requirements>
+        <requirement type="package" version="2.7.10">python</requirement>
+        <requirement type="package" version="1.0.0">galaxy_json_data_source</requirement>
+    </requirements>
+    <stdio>
+        <exit_code range="1:" />
+        <exit_code range=":-1" />
+    </stdio>
+    <version_command>json_data_source.py --version</version_command>
+    <command>json_data_source.py "${__app__.config.output_size_limit}" --json_param_file "${output1}" --path "."</command>
+    <inputs check_values="False" action="http://bioinf.iasi.cnr.it/iristcga/services_workspace/services/iris_tcga/main.php" >
+        <param name="URL" type="hidden" value="" />
+    </inputs>
+    <outputs>
+        <data format="auto" name="output1" />
+    </outputs>
+    <options sanitize="False" refresh="True"/>
+</tool>
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed May 31 10:35:52 2017 -0400
@@ -0,0 +1,9 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="python" version="2.7.10">
+        <repository changeset_revision="bd7165ea6526" name="package_python_2_7_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="galaxy_json_data_source" version="1.0.0">
+        <repository changeset_revision="5ea54764a6b9" name="package_galaxy_json_data_source" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+</tool_dependency>