Mercurial > repos > fabio > sbtas_se
comparison query.xml @ 14:e780b47013df draft
Uploaded 20180201
| author | fabio |
|---|---|
| date | Thu, 01 Feb 2018 17:13:30 -0500 |
| parents | 039e8e1e8b1f |
| children | b71df3e43248 |
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| 13:b5f070767ed4 | 14:e780b47013df |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool name="Query" id="sbtas_se_query" version="1.0.0"> | 2 <tool name="Query" id="sbtas_se_query" version="1.0.0" profile="18.01"> |
| 3 <description>the AllSome Sequence Bloom Tree</description> | 3 <description>the AllSome Sequence Bloom Tree</description> |
| 4 <requirements> | 4 <requirements> |
| 5 <requirement type="package" version="2.7.10">python</requirement> | 5 <requirement type="package" version="2.7.10">python</requirement> |
| 6 <requirement type="package" version="2.18.4">requests</requirement> | 6 <requirement type="package" version="2.18.4">requests</requirement> |
| 7 </requirements> | 7 </requirements> |
| 23 #elif $conditional_input.inputtype == '1': | 23 #elif $conditional_input.inputtype == '1': |
| 24 --sequences '${conditional_input.sequences}' | 24 --sequences '${conditional_input.sequences}' |
| 25 #end if | 25 #end if |
| 26 | 26 |
| 27 --outputdir 'collection_content' | 27 --outputdir 'collection_content' |
| 28 --errorfile 'Error Log File' | |
| 28 ]]> | 29 ]]> |
| 29 </command> | 30 </command> |
| 30 <inputs> | 31 <inputs> |
| 31 <conditional name="conditional_input"> | 32 <conditional name="conditional_input"> |
| 32 <param name="inputtype" type="select" label="Input mode" help="Select a mode based on how do you want to specify the input"> | 33 <param name="inputtype" type="select" label="Input mode" help="Select a mode based on how do you want to specify the input"> |