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changeset 9:17983775f1b0 draft

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Uploaded
author fcaramia
date Mon, 28 Jan 2013 20:12:15 -0500
parents 734516a21b52
children 86292c2b0ba9
files htseq.xml
diffstat 1 files changed, 4 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/htseq.xml	Thu Sep 13 00:51:13 2012 -0400
+++ b/htseq.xml	Mon Jan 28 20:12:15 2013 -0500
@@ -1,4 +1,8 @@
 <tool id="htseq-count" name="Count reads in features with htseq-count" version="1.0.0">
+  <requirements>
+      <requirement type="package" version="0.1.18">samtools</requirement>
+      <requirement type="python library" version="0.5.3p9">htseq</requirement>
+  </requirements>
   <description> - Create a digital expression matrix by counting reads in features with htseq-count</description>
   <command interpreter="perl">
   	htseq.pl -m $MODE -s $STRANDED -a $MINAQUAL -t $FEATURETYPE -i $IDATTR -g $gff_file -o $output -r $report $REDUCE