Mercurial > repos > fcaramia > methylation_analysis_bismark
diff Galaxy-Workflow-Differential_Methylation_Bismark.ga @ 13:4eeda563e6c1 draft
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author | fcaramia |
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date | Tue, 08 Jan 2013 18:51:48 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Galaxy-Workflow-Differential_Methylation_Bismark.ga Tue Jan 08 18:51:48 2013 -0500 @@ -0,0 +1,229 @@ +{ + "a_galaxy_workflow": "true", + "annotation": "Compare Methylation levels of 2 samples", + "format-version": "0.1", + "name": "Differential_Methylation_Bismark", + "steps": { + "0": { + "annotation": "", + "id": 0, + "input_connections": {}, + "inputs": [], + "name": "Bismark", + "outputs": [ + { + "name": "summary", + "type": "txt" + }, + { + "name": "output", + "type": "bam" + } + ], + "position": { + "left": 198, + "top": 200 + }, + "post_job_actions": {}, + "tool_errors": null, + "tool_id": "toolshed.g2.bx.psu.edu/repos/fcaramia/methylation_analysis_bismark/bismark_tool/0.7.6", + "tool_state": "{\"__page__\": 0, \"format_option\": \"\\\"fastq\\\"\", \"genome\": \"\\\"bismark.dm3.BDGP5.25.62\\\"\", \"option_input\": \"{\\\"input_option\\\": \\\"mates\\\", \\\"file_mate1\\\": null, \\\"__current_case__\\\": 0, \\\"file_mate2\\\": 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