annotate conf_hmdb.cfg @ 7:ecf8e43aceda draft

planemo upload commit d1a5cd8f1baf00879ffa44649883f91c64f43392
author fgiacomoni
date Fri, 19 Jan 2018 10:27:38 -0500
parents 520778e357cc
children 97788e4bf3fc
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
1 ## Conf file for wsdl_hmdb.pl script
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
2 #
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
3 ## Version -- edited by F.Giacomoni
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
4 VERSION=2016-11-28
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
5 #
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
6 ## ARGVT
5
520778e357cc planemo upload commit c49b69597de7f1ce2034815e968fbf5d7c0373c4
fgiacomoni
parents: 1
diff changeset
7 # Hmdb limits per job (max is 700)
520778e357cc planemo upload commit c49b69597de7f1ce2034815e968fbf5d7c0373c4
fgiacomoni
parents: 1
diff changeset
8 HMDB_LIMITS=500
1
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
9 ## Maximum query filtered (default is 20 - min : 1 / max 50)
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
10 HMDB_MAX_QUERY=20
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
11 ## Galaxy url for HTML JS and CSS path
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
12 JS_GALAXY_PATH=https://cdn.rawgit.com/fgiacomoni/galaxy_utils/master/scripts
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
13 CSS_GALAXY_PATH=https://cdn.rawgit.com/fgiacomoni/galaxy_utils/master/style
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
14 #
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
15 ## HTML OUTPUT :
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
16 HTML_ENTRIES_PER_PAGE=4
6d0a0f8f672a planemo upload commit f67323ae4fa7fdbd9f4518ede105a7d7cd44b471
fgiacomoni
parents:
diff changeset
17 HMDB_METABOCARD_URL=http://www.hmdb.ca/metabolites/