annotate qiime2/qiime_diversity-lib_observed-features.xml @ 16:5021f9d76de4 draft

Deleted selected files

<?xml version="1.0" ?>
<tool id="qiime_diversity-lib_observed-features" name="qiime diversity-lib observed-features"
      version="2020.8">
  <description>Observed Features</description>
  <requirements>
    <requirement type="package" version="2020.8">qiime2</requirement>
  </requirements>
  <command><![CDATA[
qiime diversity-lib observed-features

#if $itable:
 --i-table
#end if

--o-vector=ovector

#if str($examples) != 'None':
--examples=$examples
#end if

;
cp ovector.qza $ovector

  ]]></command>
  <inputs>
    <param format="qza,no_unzip.zip" label="--i-table: --i-table: ARTIFACT FeatureTable[Frequency | RelativeFrequency | PresenceAbsence]   The feature table containing the samples for which the number of observed features should be calculated. Table values will be converted to presence/absence. [required]" name="itable" selected="False" type="boolean" />
    <param label="--examples: Show usage examples and exit." name="examples" optional="False" type="data" />
    
  </inputs>

  <outputs>
    <data format="qza" label="${tool.name} on ${on_string}: vector.qza" name="ovector" />
    
  </outputs>

  <help><![CDATA[
Observed Features
###############################################################

Compute the number of observed features for each sample in a feature table

Parameters
----------
table : FeatureTable[Frequency | RelativeFrequency | PresenceAbsence]
    The feature table containing the samples for which the number of
    observed features should be calculated. Table values will be converted
    to presence/absence.

Returns
-------
vector : SampleData[AlphaDiversity]
    Vector containing per-sample counts of observed features.
  ]]></help>
  <macros>
    <import>qiime_citation.xml</import>
  </macros>
  <expand macro="qiime_citation"/>
</tool>