Mercurial > repos > florianbegusch > qiime2_suite

comparison qiime2/qiime_metadata_tabulate.xml @ 2:51025741f326 draft

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Uploaded
author florianbegusch
date Thu, 18 Jul 2019 12:19:15 -0400
parents 370e0b6e9826
children 558645416841
comparison
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1:255f48db74f8 2:51025741f326
6 </requirements> 6 </requirements>
7 <command><![CDATA[ 7 <command><![CDATA[
8 qiime metadata tabulate 8 qiime metadata tabulate
9 9
10 10
11 #if $input_files_mmetadatafile:
11 #def list_dict_to_string(list_dict): 12 #def list_dict_to_string(list_dict):
12 #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name') 13 #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name')
13 #for d in list_dict[1:]: 14 #for d in list_dict[1:]:
14 #set $file_list = $file_list + ' --m-input-file=' + d['additional_input'].__getattr__('file_name') 15 #set $file_list = $file_list + ' --m-input-file=' + d['additional_input'].__getattr__('file_name')
15 #end for 16 #end for
16 #return $file_list 17 #return $file_list
17 #end def 18 #end def
18 --m-input-file=$list_dict_to_string($input_files_minputfile) 19 --m-input-file=$list_dict_to_string($input_files_minputfile)
20 #end if
19 21
20 22
21 #if $ppagesize: 23 #if $ppagesize:
22 --p-page-size=$ppagesize 24 --p-page-size=$ppagesize
23 #end if 25 #end if