Mercurial > repos > florianbegusch > qiime2_suite

comparison qiime2/qiime_diversity_bioenv.xml @ 4:914fa4daf16a draft

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Fixes
author florianbegusch
date Wed, 31 Jul 2019 03:06:00 -0400
parents 370e0b6e9826
children f190567fe3f6
comparison
equal deleted inserted replaced
3:558645416841 4:914fa4daf16a
22 #end if 22 #end if
23 23
24 24
25 --o-visualization=ovisualization 25 --o-visualization=ovisualization
26 ; 26 ;
27 cp mmetadatafile.qza $mmetadatafile;
28 qiime tools export --input-path ovisualization.qzv --output-path out && mkdir -p '$ovisualization.files_path' 27 qiime tools export --input-path ovisualization.qzv --output-path out && mkdir -p '$ovisualization.files_path'
29 && cp -r out/* '$ovisualization.files_path' 28 && cp -r out/* '$ovisualization.files_path'
30 && mv '$ovisualization.files_path/index.html' '$ovisualization'; 29 && mv '$ovisualization.files_path/index.html' '$ovisualization';
31 ]]></command> 30 ]]></command>
32 <inputs> 31 <inputs>
33 <param format="qza,no_unzip.zip" label="--i-distance-matrix: ARTIFACT DistanceMatrix Matrix of distances between pairs of samples. [required]" name="idistancematrix" optional="False" type="data"/> 32 <param format="qza,no_unzip.zip" label="--i-distance-matrix: ARTIFACT DistanceMatrix Matrix of distances between pairs of samples. [required]" name="idistancematrix" optional="False" type="data"/>
34 33
35 <repeat name="input_files_mmetadatafile" optional="True" title="--m-metadata-file"> 34 <repeat name="input_files_mmetadatafile" optional="True" title="--m-metadata-file [required]">
36 <param label="--m-metadata-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. [optional]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" /> 35 <param label="--m-metadata-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. [optional]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" />
37 </repeat> 36 </repeat>
38 37
39 </inputs> 38 </inputs>
40 <outputs> 39 <outputs>