comparison qiime2-2020.8/qiime_feature-table_relative-frequency.xml @ 20:d93d8888f0b0 draft

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20:d93d8888f0b0

<?xml version="1.0" ?>
<tool id="qiime_feature-table_relative-frequency" name="qiime feature-table relative-frequency"
      version="2020.8">
  <description>Convert to relative frequencies</description>
  <requirements>
    <requirement type="package" version="2020.8">qiime2</requirement>
  </requirements>
  <command><![CDATA[
qiime feature-table relative-frequency

--i-table=$itable

--o-relative-frequency-table=orelativefrequencytable

#if str($examples) != 'None':
--examples=$examples
#end if

;
cp orelativefrequencytable.qza $orelativefrequencytable

  ]]></command>
  <inputs>
    <param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] The feature table to be converted into relative frequencies.                                 [required]" name="itable" optional="False" type="data" />
    <param label="--examples: Show usage examples and exit." name="examples" optional="False" type="data" />
    
  </inputs>

  <outputs>
    <data format="qza" label="${tool.name} on ${on_string}: relativefrequencytable.qza" name="orelativefrequencytable" />
    
  </outputs>

  <help><![CDATA[
Convert to relative frequencies
###############################################################

Convert frequencies to relative frequencies by dividing each frequency in a
sample by the sum of frequencies in that sample.

Parameters
----------
table : FeatureTable[Frequency]
    The feature table to be converted into relative frequencies.

Returns
-------
relative_frequency_table : FeatureTable[RelativeFrequency]
    The resulting relative frequency feature table.
  ]]></help>
  <macros>
    <import>qiime_citation.xml</import>
  </macros>
  <expand macro="qiime_citation"/>
</tool>